Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 HSBP1P1-201ENST00000555205 166 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 AC060766.3-201ENST00000591442 263 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 AC091925.1-201ENST00000623204 462 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.83□□□□□ -1.8
CCDC113Q9H0I3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 RNU1-33P-201ENST00000364249 162 ntBASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 GPM6BP3-201ENST00000442797 145 ntBASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 RPL30P10-201ENST00000488148 337 ntBASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 RPS27P26-201ENST00000494583 239 ntBASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 RN7SKP272-201ENST00000516988 232 ntBASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 AC026333.2-201ENST00000542164 106 ntBASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 AC116312.1-201ENST00000606841 314 ntBASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 RNU6-91P-201ENST00000607774 107 ntBASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC113Q9H0I3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 AC005592.1-201ENST00000566527 1640 ntBASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 AC068647.1-201ENST00000489539 2265 ntBASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 SNORD32A-201ENST00000364805 84 ntBASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 RNU4-9P-201ENST00000364951 139 ntBASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 Y_RNA.459-201ENST00000384251 102 ntBASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 RNU6-622P-201ENST00000384272 103 ntBASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 RNU7-169P-201ENST00000459456 61 ntBASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 AC026784.1-201ENST00000507986 352 ntBASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 AC091874.1-201ENST00000511402 339 ntBASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 DNAJC8P1-201ENST00000554535 372 ntBASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 MIR5701-3-201ENST00000578890 82 ntBASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 MIR5701-1-201ENST00000585138 82 ntBASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 AL391813.1-201ENST00000603098 260 ntBASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 MIR5701-2-201ENST00000615634 82 ntBASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 AL138825.1-201ENST00000618587 192 ntBASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 SNORA50A-202ENST00000629536 136 ntBASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC113Q9H0I3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 MTND5P1-201ENST00000445440 1375 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 SNORD114-19-201ENST00000363072 75 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 RNU6-799P-201ENST00000363567 107 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 RNA5SP50-201ENST00000363731 107 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 RNA5SP139-201ENST00000364340 117 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 RNU6-1286P-201ENST00000383871 107 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 Y_RNA.405-201ENST00000383979 100 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 Y_RNA.424-201ENST00000384063 103 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 Y_RNA.451-201ENST00000384200 100 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 Y_RNA.524-201ENST00000384564 100 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 Y_RNA.561-201ENST00000384694 100 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 AC244670.1-201ENST00000436879 112 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 Y_RNA.706-201ENST00000516933 99 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 IGKV2-26-201ENST00000518305 343 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 AC100812.1-201ENST00000607622 580 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 AC084757.4-201ENST00000616350 526 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 AL606534.2-204ENST00000635008 178 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 AC008669.1-201ENST00000565823 2178 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 AC002543.1-201ENST00000299783 1954 ntBASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC113Q9H0I3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 U3.13-201ENST00000364804 214 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 SNORA69.1-201ENST00000390904 137 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 SNORA12.2-201ENST00000391040 156 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 SNORA48.8-201ENST00000391324 134 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 RPL23AP95-201ENST00000426806 265 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 AC078809.1-201ENST00000427601 140 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 AC004383.1-201ENST00000438135 289 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 OSTCP8-201ENST00000445117 448 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 CYCSP35-201ENST00000451978 304 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 snoU13.30-201ENST00000458951 104 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms