Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 RNY1-201ENST00000364228 113 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 RNU6-937P-201ENST00000384325 106 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 MIR34A-201ENST00000385130 110 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 MTCYBP2-201ENST00000407745 171 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 MIR1298-201ENST00000408783 112 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 Y_RNA.793-201ENST00000411222 111 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.83□□□□□ -1.8
RNF38Q9H0F5 Z82188.1-201ENST00000436709 154 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 ANP32BP2-201ENST00000454525 545 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 RN7SL293P-201ENST00000481765 281 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 AC110768.1-201ENST00000509222 400 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 RNU6-377P-201ENST00000515965 102 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 RNU6-572P-201ENST00000516724 80 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 RNU6-928P-201ENST00000516876 104 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 AC011602.1-201ENST00000546484 331 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.83□□□□□ -1.8
RNF38Q9H0F5 RPL23AP78-201ENST00000599928 470 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 HSPE1P7-201ENST00000604681 321 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 AC005046.1-201ENST00000608515 625 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 FTX_3.1-201ENST00000610451 147 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 AC099506.2-201ENST00000623074 221 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.83□□□□□ -1.8
RNF38Q9H0F5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
RNF38Q9H0F5 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RNF38Q9H0F5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.83□□□□□ -1.8
RNF38Q9H0F5 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNF38Q9H0F5 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF38Q9H0F5 AL136164.4-201ENST00000625013 2135 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF38Q9H0F5 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF38Q9H0F5 RNU6-222P-201ENST00000362438 107 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 SNORD9-201ENST00000362566 104 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 RNU6-336P-201ENST00000364891 107 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 RNU5E-7P-201ENST00000365290 117 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 SNORD6-201ENST00000365444 73 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF38Q9H0F5 RNU6-187P-201ENST00000384139 106 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 RNU6-166P-201ENST00000384371 107 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 RNY3P4-201ENST00000384428 101 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 RNU6-1035P-201ENST00000384477 107 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 RNU6-102P-201ENST00000384485 104 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 MIR183-201ENST00000384958 110 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF38Q9H0F5 MTCO2P33-201ENST00000402100 465 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 HLFP1-201ENST00000402375 499 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 AL139156.1-201ENST00000412785 841 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF38Q9H0F5 RPL21P40-201ENST00000428586 483 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF38Q9H0F5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF38Q9H0F5 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
RNF38Q9H0F5 AL138752.1-201ENST00000452964 351 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 RPL7P49-201ENST00000471402 708 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 RPL32P34-201ENST00000486380 400 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 SERF1AP1-201ENST00000514575 187 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 RNU7-175P-201ENST00000515915 61 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 AC109479.2-201ENST00000517842 174 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 AP002770.2-201ENST00000543613 532 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 AC104581.2-201ENST00000572227 430 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 BRDTP1-201ENST00000605735 677 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 Y_RNA.772-201ENST00000606692 102 ntBASIC3.82□□□□□ -1.8
RNF38Q9H0F5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RNF38Q9H0F5 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF38Q9H0F5 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.82□□□□□ -1.8
RNF38Q9H0F5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.82□□□□□ -1.8
RNF38Q9H0F5 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF38Q9H0F5 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF38Q9H0F5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
RNF38Q9H0F5 AC007256.1-201ENST00000392253 2765 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RNF38Q9H0F5 AC007656.2-201ENST00000624902 4547 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RNF38Q9H0F5 HAUS6P2-201ENST00000433254 2404 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF38Q9H0F5 SNORD113-8-201ENST00000363497 74 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 SNORD46.1-201ENST00000364139 104 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 RNA5SP387-201ENST00000364226 106 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 Y_RNA.581-201ENST00000391017 97 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 SNORA40C-201ENST00000391285 128 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 PCNPP3-201ENST00000393579 471 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 RPS29P13-201ENST00000402041 169 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF38Q9H0F5 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.81□□□□□ -1.8
RNF38Q9H0F5 BX679664.1-201ENST00000434429 253 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF38Q9H0F5 AC013470.1-201ENST00000453438 462 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF38Q9H0F5 AC092798.1-201ENST00000458542 409 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 U3.44-201ENST00000458938 192 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 RPL23AP62-201ENST00000463396 453 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF38Q9H0F5 ANXA2P1-201ENST00000505539 926 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 AC022868.1-201ENST00000517767 391 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 HIGD1AP1-201ENST00000550979 275 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 MIR4643-201ENST00000577473 78 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 MIR3944-201ENST00000581277 108 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 MIR3133-201ENST00000583157 78 ntBASIC3.81□□□□□ -1.8
RNF38Q9H0F5 AC012468.1-201ENST00000604888 430 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms