Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 MTND5P22-201ENST00000458380 195 ntBASIC3.12□□□□□ -1.91
CIPCQ9C0C6 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.12□□□□□ -1.91
CIPCQ9C0C6 AK3P2-201ENST00000507976 429 ntBASIC3.12□□□□□ -1.91
CIPCQ9C0C6 RNU6-264P-201ENST00000517134 104 ntBASIC3.12□□□□□ -1.91
CIPCQ9C0C6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CIPCQ9C0C6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.12□□□□□ -1.91
CIPCQ9C0C6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.12□□□□□ -1.91
CIPCQ9C0C6 AL158827.2-201ENST00000602494 330 ntBASIC3.12□□□□□ -1.91
CIPCQ9C0C6 AC004852.3-201ENST00000614131 326 ntBASIC3.12□□□□□ -1.91
CIPCQ9C0C6 AC008121.3-201ENST00000618726 433 ntBASIC3.12□□□□□ -1.91
CIPCQ9C0C6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.12□□□□□ -1.91
CIPCQ9C0C6 AC090617.7-201ENST00000623952 126 ntBASIC3.12□□□□□ -1.91
CIPCQ9C0C6 AL691447.3-201ENST00000635020 330 ntBASIC3.12□□□□□ -1.91
CIPCQ9C0C6 SRP72P2-201ENST00000344851 1979 ntBASIC3.12□□□□□ -1.91
CIPCQ9C0C6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CIPCQ9C0C6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CIPCQ9C0C6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CIPCQ9C0C6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CIPCQ9C0C6 RNU6-336P-201ENST00000364891 107 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 RNU6-805P-201ENST00000365643 106 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 RPS29P13-201ENST00000402041 169 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 AL591034.1-201ENST00000407447 340 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 U3.37-201ENST00000408528 213 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 RNU6-985P-201ENST00000410182 104 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 AL358176.2-201ENST00000425769 204 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 AL353997.1-201ENST00000432936 108 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 HMGB3P8-201ENST00000449709 577 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 SNORA59A-201ENST00000459326 152 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 U8.21-201ENST00000459536 136 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 AC133134.1-201ENST00000466800 359 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 RPL17P19-201ENST00000489069 552 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 AC021146.2-201ENST00000504736 556 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 RNU6-377P-201ENST00000515965 102 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 AP000889.1-201ENST00000530968 660 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 LINC00933-203ENST00000559812 219 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.11□□□□□ -1.91
CIPCQ9C0C6 MIR4273-201ENST00000582824 84 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 AC008962.1-201ENST00000605729 304 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 MIR7106-201ENST00000612419 65 ntBASIC3.11□□□□□ -1.91
CIPCQ9C0C6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CIPCQ9C0C6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CIPCQ9C0C6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CIPCQ9C0C6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.11□□□□□ -1.91
CIPCQ9C0C6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.11□□□□□ -1.91
CIPCQ9C0C6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CIPCQ9C0C6 AC091152.2-201ENST00000591628 2569 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 MTND5P16-201ENST00000460269 1703 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CIPCQ9C0C6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.1□□□□□ -1.91
CIPCQ9C0C6 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.1□□□□□ -1.91
CIPCQ9C0C6 CUL1P1-201ENST00000509510 2425 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CIPCQ9C0C6 RNU6-942P-201ENST00000363002 107 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 Y_RNA.133-201ENST00000363428 110 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 RNU6-898P-201ENST00000365627 104 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 RNU6-1105P-201ENST00000384774 107 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 MIR521-1-201ENST00000384902 87 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 AL356057.3-201ENST00000402607 340 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.1□□□□□ -1.91
CIPCQ9C0C6 RPL23AP22-201ENST00000437556 453 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 AC125238.1-201ENST00000448842 249 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 RPL37P4-201ENST00000448908 268 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 RPS29P27-201ENST00000463711 170 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.1□□□□□ -1.91
CIPCQ9C0C6 RPS27AP10-201ENST00000496103 208 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 AC097462.2-201ENST00000504623 481 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 AC006445.2-201ENST00000510061 472 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 AC010265.1-201ENST00000513509 211 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 RNU6-612P-201ENST00000516909 102 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 AP005902.1-201ENST00000521358 186 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 AC010653.1-201ENST00000571108 881 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 AC092447.9-201ENST00000603395 144 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.1□□□□□ -1.91
CIPCQ9C0C6 MIR8076-201ENST00000611401 83 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 AC092628.2-201ENST00000622492 339 ntBASIC3.1□□□□□ -1.91
CIPCQ9C0C6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
CIPCQ9C0C6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CIPCQ9C0C6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CIPCQ9C0C6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.09□□□□□ -1.91
CIPCQ9C0C6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CIPCQ9C0C6 Y_RNA.80-201ENST00000362996 102 ntBASIC3.09□□□□□ -1.91
CIPCQ9C0C6 U3.6-201ENST00000363622 211 ntBASIC3.09□□□□□ -1.91
CIPCQ9C0C6 Y_RNA.533-201ENST00000384596 114 ntBASIC3.09□□□□□ -1.91
CIPCQ9C0C6 Y_RNA.645-201ENST00000391229 102 ntBASIC3.09□□□□□ -1.91
CIPCQ9C0C6 RPS4XP3-201ENST00000398541 413 ntBASIC3.09□□□□□ -1.91
CIPCQ9C0C6 EEF1A1P41-201ENST00000414667 207 ntBASIC3.09□□□□□ -1.91
CIPCQ9C0C6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.09□□□□□ -1.91
CIPCQ9C0C6 AC099548.1-201ENST00000421443 426 ntBASIC3.09□□□□□ -1.91
CIPCQ9C0C6 MTND3P9-201ENST00000429526 346 ntBASIC3.09□□□□□ -1.91
CIPCQ9C0C6 AC099799.1-201ENST00000439809 192 ntBASIC3.09□□□□□ -1.91
CIPCQ9C0C6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.09□□□□□ -1.91
CIPCQ9C0C6 RPS29P20-201ENST00000489592 171 ntBASIC3.09□□□□□ -1.91
CIPCQ9C0C6 AC105758.1-201ENST00000506038 399 ntBASIC3.09□□□□□ -1.91
CIPCQ9C0C6 AC116655.1-201ENST00000508324 901 ntBASIC3.09□□□□□ -1.91
CIPCQ9C0C6 SNORA43.2-201ENST00000516652 128 ntBASIC3.09□□□□□ -1.91
CIPCQ9C0C6 RNU4-77P-201ENST00000516692 156 ntBASIC3.09□□□□□ -1.91
CIPCQ9C0C6 AC023442.1-201ENST00000531247 422 ntBASIC3.09□□□□□ -1.91
CIPCQ9C0C6 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.09□□□□□ -1.91
CIPCQ9C0C6 MIR5696-201ENST00000578474 85 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms