Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
UPF3BQ9BZI7 SNORD33-201ENST00000362761 85 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 RNU6-944P-201ENST00000364023 107 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 SNORA62.1-201ENST00000364287 154 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 MIR618-201ENST00000385287 98 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 USP9YP33-201ENST00000412220 421 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 AC009518.2-201ENST00000418056 731 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 CST2P1-201ENST00000425770 87 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 USP9YP35-201ENST00000435696 412 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 NDUFB1P2-201ENST00000449477 176 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 RPS26P55-201ENST00000471178 356 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 RPL30P7-201ENST00000479312 323 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 MTND1P3-201ENST00000484956 952 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 AP001025.1-201ENST00000486139 332 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 AC010409.1-201ENST00000487382 476 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 RN7SKP265-201ENST00000516448 223 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 RNU6-914P-201ENST00000516749 109 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 AC002400.1-201ENST00000569310 726 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 AC137800.2-201ENST00000574375 120 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 MIR3169-201ENST00000578032 83 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 AL596327.1-201ENST00000603629 213 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 MIR98-201ENST00000606724 119 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 AL121890.5-201ENST00000620848 304 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 FRG1KP-201ENST00000623592 341 ntBASIC1.22□□□□□ -2.21
UPF3BQ9BZI7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 MIR302D-201ENST00000362275 68 ntBASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 RNU6-23P-201ENST00000363283 107 ntBASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 RNA5SP457-201ENST00000363657 124 ntBASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 RNU6-271P-201ENST00000363858 105 ntBASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 SNORA25.8-201ENST00000364831 128 ntBASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 SNORA4.3-201ENST00000365564 137 ntBASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 MIR193B-201ENST00000384907 83 ntBASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 AC016831.2-201ENST00000417179 352 ntBASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 EBAG9P1-201ENST00000418955 543 ntBASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 HMGN1P33-201ENST00000432945 451 ntBASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 MTND1P16-201ENST00000465177 898 ntBASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 RPL30P6-201ENST00000475925 342 ntBASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 AC108729.1-201ENST00000487812 947 ntBASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 AC109445.1-201ENST00000512356 383 ntBASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 AC009712.1-201ENST00000564938 316 ntBASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 AC112220.2-201ENST00000605513 533 ntBASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 AL158163.2-201ENST00000619110 700 ntBASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.21□□□□□ -2.22
UPF3BQ9BZI7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 RNA5SP493-201ENST00000364115 91 ntBASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 Y_RNA.251-201ENST00000364551 99 ntBASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 RNU1-133P-201ENST00000364867 167 ntBASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 AL365338.1-201ENST00000422282 858 ntBASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 UBE2V1P8-201ENST00000437166 265 ntBASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 RNU1-131P-201ENST00000458943 161 ntBASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 RPL30P1-201ENST00000488676 339 ntBASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 RNU6-677P-201ENST00000516914 101 ntBASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 MIR1273G-201ENST00000577677 100 ntBASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 AL020996.3-201ENST00000606617 222 ntBASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 AL355802.3-201ENST00000607571 545 ntBASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 AC022893.3-201ENST00000607665 437 ntBASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 AL512427.1-201ENST00000618593 349 ntBASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 AC007792.1-201ENST00000623023 402 ntBASIC1.2□□□□□ -2.22
UPF3BQ9BZI7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
UPF3BQ9BZI7 SNORA70.7-201ENST00000384159 133 ntBASIC1.19□□□□□ -2.22
UPF3BQ9BZI7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.19□□□□□ -2.22
UPF3BQ9BZI7 AC006026.2-201ENST00000457376 180 ntBASIC1.19□□□□□ -2.22
UPF3BQ9BZI7 SUMO2P5-201ENST00000506790 245 ntBASIC1.19□□□□□ -2.22
UPF3BQ9BZI7 RNU6-965P-201ENST00000516721 96 ntBASIC1.19□□□□□ -2.22
UPF3BQ9BZI7 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.19□□□□□ -2.22
UPF3BQ9BZI7 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.19□□□□□ -2.22
UPF3BQ9BZI7 AC025678.1-201ENST00000567861 338 ntBASIC1.19□□□□□ -2.22
UPF3BQ9BZI7 AC012414.6-201ENST00000568241 401 ntBASIC1.19□□□□□ -2.22
UPF3BQ9BZI7 MTND3P13-201ENST00000574391 343 ntBASIC1.19□□□□□ -2.22
UPF3BQ9BZI7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.19□□□□□ -2.22
UPF3BQ9BZI7 AC022022.2-201ENST00000602989 360 ntBASIC1.19□□□□□ -2.22
UPF3BQ9BZI7 AL022154.1-201ENST00000604698 785 ntBASIC1.19□□□□□ -2.22
UPF3BQ9BZI7 AL159153.1-201ENST00000619688 317 ntBASIC1.19□□□□□ -2.22
UPF3BQ9BZI7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
UPF3BQ9BZI7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 MIR412-201ENST00000362142 91 ntBASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 RNU6-414P-201ENST00000363705 104 ntBASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 RNU4-38P-201ENST00000364472 129 ntBASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 RNU6-72P-201ENST00000384285 79 ntBASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 MIR1267-201ENST00000408723 78 ntBASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 RPL37P10-201ENST00000412884 288 ntBASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 RPL21P90-201ENST00000415692 466 ntBASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 AL627311.1-201ENST00000431514 115 ntBASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 FTH1P12-201ENST00000432137 551 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms