Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC069439.1-201ENST00000494739 167 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 FAM92A1P2-202ENST00000504766 877 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 AC109927.2-201ENST00000506416 303 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 AC104806.1-201ENST00000508720 308 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 AC116337.1-201ENST00000509680 687 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 SCARNA11.3-201ENST00000517276 130 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 ZNF519P2-201ENST00000557032 169 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 MIR4703-201ENST00000577728 79 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 MIR5583-1-201ENST00000580941 59 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 MIR1321-201ENST00000637766 79 ntBASIC1.76□□□□□ -2.13
RSPO3Q9BXY4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 RNU6-552P-201ENST00000362869 119 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 RNU6-1322P-201ENST00000364309 107 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 SNORD48-201ENST00000364953 64 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 RNU6-741P-201ENST00000383889 107 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 RNU6-217P-201ENST00000384164 104 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 RNU6-140P-201ENST00000384566 108 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 RNU6-550P-201ENST00000391057 101 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 CIR1P3-201ENST00000405137 479 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 RNU6-648P-201ENST00000410190 107 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 RNU6-1068P-201ENST00000410958 103 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AC099548.1-201ENST00000421443 426 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 HMGN2P19-201ENST00000425149 265 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AC003989.2-201ENST00000440224 169 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 DDX3P2-201ENST00000446138 111 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 FGF7P6-202ENST00000451282 293 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AC022364.2-201ENST00000457963 554 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 RNU7-63P-201ENST00000459054 62 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 RPS29P25-201ENST00000481709 171 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AL163973.1-201ENST00000484753 577 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AL117351.2-201ENST00000513571 157 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AC105417.1-201ENST00000514691 285 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 RNU6-1282P-201ENST00000516735 96 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AC009902.1-201ENST00000519351 183 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AC174048.1-201ENST00000603389 144 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AP000907.4-201ENST00000604143 237 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AC004805.2-201ENST00000605382 482 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 FTX_3.1-201ENST00000610451 147 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 AL161423.1-201ENST00000613700 262 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 SDR42E1P4-201ENST00000620894 481 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 DUXAP9-208ENST00000622815 614 ntBASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
RSPO3Q9BXY4 MTND4P27-201ENST00000450813 1354 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 Y_RNA.245-201ENST00000364493 95 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 Y_RNA.248-201ENST00000364501 109 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 Y_RNA.255-201ENST00000364581 97 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 RNU6-1283P-201ENST00000365314 105 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 RNU4-20P-201ENST00000365601 151 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 RNU6-116P-201ENST00000384042 109 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 RNU6-190P-201ENST00000384154 102 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 MIR578-201ENST00000384828 96 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 U8.13-201ENST00000390842 128 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 RNU6-220P-201ENST00000390919 107 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 OR6C66P-201ENST00000414917 930 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 AL160275.3-201ENST00000423876 471 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 SKA2P1-201ENST00000425592 390 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 AL669831.1-202ENST00000428504 417 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 AL590383.1-201ENST00000428602 75 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 AL596276.1-201ENST00000434465 418 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 GTF2IP13-201ENST00000438487 386 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 RNU6-953P-201ENST00000459154 107 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 RNU7-180P-201ENST00000459240 63 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 RPS29P20-201ENST00000489592 171 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 RNA5SP182-201ENST00000516064 82 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 RNU6-1281P-201ENST00000516223 105 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 RNU6-677P-201ENST00000516914 101 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 RNA5SP503-201ENST00000517047 117 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 RNA5SP290-201ENST00000517133 127 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 RNA5SP165-201ENST00000517142 115 ntBASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.74□□□□□ -2.13
RSPO3Q9BXY4 MTND1P35-201ENST00000526739 508 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms