Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC091826.1-201ENST00000514065 313 ntBASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 AC021739.1-201ENST00000559631 174 ntBASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 AC026470.2-201ENST00000561492 181 ntBASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 HMGN2P15-201ENST00000585707 270 ntBASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 AL606534.2-204ENST00000635008 178 ntBASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LRFN3Q9BTN0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-37P-201ENST00000362692 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-11P-201ENST00000364234 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-1329P-201ENST00000365664 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 Z98749.2-208ENST00000381646 500 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-25P-201ENST00000383873 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-1-201ENST00000383898 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 Y_RNA.396-201ENST00000383949 103 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-48P-201ENST00000384161 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-36P-201ENST00000384172 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-4P-201ENST00000384205 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-5P-201ENST00000384238 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-842P-201ENST00000384269 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-3P-201ENST00000384314 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-16P-201ENST00000384385 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 Y_RNA.489-201ENST00000384410 101 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-15P-201ENST00000384534 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-2-201ENST00000384627 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-29P-201ENST00000384637 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 SNORA41-201ENST00000384675 132 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-9-201ENST00000384776 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-33P-201ENST00000384793 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 MTHFD2P2-201ENST00000407725 247 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RN7SKP111-201ENST00000410349 271 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 MRPS18CP6-201ENST00000423587 223 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RPS15AP10-201ENST00000432472 382 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 SUMO1P2-201ENST00000452524 304 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 AL353752.1-201ENST00000454946 260 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 AC112492.4-201ENST00000456549 352 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 AL031183.1-201ENST00000457667 207 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RPS26P15-201ENST00000488067 348 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 FCF1P8-201ENST00000510322 597 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 AC092436.3-201ENST00000511788 257 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNY3P15-201ENST00000516297 97 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 Y_RNA.687-201ENST00000516558 91 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-307P-201ENST00000516743 106 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 SNORD19.2-201ENST00000516978 73 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 AC010186.2-204ENST00000537668 439 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 AL355297.3-201ENST00000604082 446 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 RNU6-6P-201ENST00000606623 107 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 AL021879.1-201ENST00000611756 288 ntBASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
LRFN3Q9BTN0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 AC138393.1-203ENST00000327086 343 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 Y_RNA.39-201ENST00000362620 98 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 RNU6-1280P-201ENST00000365211 107 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 RNU6-898P-201ENST00000365627 104 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 Y_RNA.380-201ENST00000365663 111 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 Y_RNA.447-201ENST00000384184 113 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 RNU4-70P-201ENST00000384579 139 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 MIR518D-201ENST00000385014 87 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 SNORD56-201ENST00000413522 71 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 AL603825.1-201ENST00000438481 80 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 AC099799.1-201ENST00000439809 192 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 SUMO1P3-201ENST00000439961 304 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 RNU6-1037P-201ENST00000459571 107 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 AC132942.1-201ENST00000486753 483 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 RPS29P20-201ENST00000489592 171 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 RNU6-408P-201ENST00000515910 100 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 RNU6-1143P-201ENST00000516125 104 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 AC131281.1-201ENST00000522984 164 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 AC005899.2-201ENST00000584353 90 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 HMGB1P50-201ENST00000605814 607 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 AC078938.1-201ENST00000620993 318 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 AP003355.3-201ENST00000623465 114 ntBASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LRFN3Q9BTN0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms