Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 Y_RNA.638-201ENST00000459374 113 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 AC091153.1-201ENST00000466297 402 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 RN7SL303P-201ENST00000469773 251 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 AC016632.1-201ENST00000503994 196 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-567P-201ENST00000516746 107 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 AC009163.5-201ENST00000575421 637 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 AC073308.1-201ENST00000623696 305 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 IGHVIII-44-202ENST00000636235 289 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 U6.106-201ENST00000636360 105 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 SNORD56.1-201ENST00000362913 68 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 RNU1-140P-201ENST00000365040 165 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-47P-201ENST00000383866 107 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-281P-201ENST00000384212 103 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 U8.10-201ENST00000384260 133 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-159P-201ENST00000391080 106 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 FTH1P15-201ENST00000406984 280 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-1001P-201ENST00000411265 100 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 AC099548.1-201ENST00000421443 426 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 AC078809.1-201ENST00000427601 140 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 WARS2P1-201ENST00000429678 537 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 GPM6BP3-201ENST00000442797 145 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 NUTF2P3-201ENST00000448540 384 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 RNA5SP310-201ENST00000459084 116 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 AC091959.1-201ENST00000495857 238 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 AC074198.2-201ENST00000508153 258 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 AC006445.2-201ENST00000510061 472 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 AL391261.3-201ENST00000557194 520 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 AC021739.1-201ENST00000559631 174 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 MIR5571-201ENST00000577998 113 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 MIR548AI-201ENST00000579940 88 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 MIR3138-201ENST00000585238 82 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 SNORA43.4-201ENST00000629559 138 ntBASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM56Q9BRZ2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 Y_RNA.136-201ENST00000363444 102 ntBASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 RNU5F-3P-201ENST00000363767 117 ntBASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-20P-201ENST00000384106 107 ntBASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 AL591034.1-201ENST00000407447 340 ntBASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 RNA5SP390-201ENST00000410191 113 ntBASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 POLR2KP2-201ENST00000438155 177 ntBASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 AC012308.1-201ENST00000451232 178 ntBASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-928P-201ENST00000516876 104 ntBASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-58P-201ENST00000517143 103 ntBASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 TVP23BP1-201ENST00000557500 617 ntBASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 MIR3939-201ENST00000582614 106 ntBASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 AC008749.1-201ENST00000597650 306 ntBASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 AC006001.4-201ENST00000622243 395 ntBASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM56Q9BRZ2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 ADAM3A-203ENST00000461344 2157 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 AC092268.1-201ENST00000342691 405 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 Y_RNA.170-201ENST00000363746 110 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 SNORD115-8-201ENST00000363856 82 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-270P-201ENST00000364131 105 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 RN7SKP280-201ENST00000364196 304 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 Y_RNA.233-201ENST00000364407 101 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 SNORD115-38-201ENST00000365037 82 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-1175P-201ENST00000365200 107 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-1145P-201ENST00000384246 107 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 MIR329-1-201ENST00000385028 80 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 MIR613-201ENST00000385248 95 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 MIR708-201ENST00000390708 88 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 RPL23AP36-201ENST00000413895 458 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 AL358075.3-201ENST00000426289 226 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 COX6B1P7-201ENST00000430845 235 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 AC006011.1-201ENST00000442758 349 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 RPS29P26-201ENST00000477483 171 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 AL592156.1-201ENST00000508758 304 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 SNORA27.4-201ENST00000516650 95 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 SNORA31.23-201ENST00000517219 133 ntBASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.16□□□□□ -1.74
TRIM56Q9BRZ2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms