Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 DYNLL1P5-201ENST00000467158 270 ntBASIC2.57□□□□□ -2
RAD9AQ99638 AC107626.1-201ENST00000471084 183 ntBASIC2.57□□□□□ -2
RAD9AQ99638 ACA59.2-201ENST00000517061 156 ntBASIC2.57□□□□□ -2
RAD9AQ99638 CENPUP1-201ENST00000526649 1202 ntBASIC2.57□□□□□ -2
RAD9AQ99638 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.57□□□□□ -2
RAD9AQ99638 AL118558.2-201ENST00000556294 238 ntBASIC2.57□□□□□ -2
RAD9AQ99638 MIR4658-201ENST00000584344 65 ntBASIC2.57□□□□□ -2
RAD9AQ99638 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.57□□□□□ -2
RAD9AQ99638 Z82243.1-201ENST00000609432 473 ntBASIC2.57□□□□□ -2
RAD9AQ99638 uc_338.14-201ENST00000613162 166 ntBASIC2.57□□□□□ -2
RAD9AQ99638 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.57□□□□□ -2
RAD9AQ99638 AC007014.2-201ENST00000615581 479 ntBASIC2.57□□□□□ -2
RAD9AQ99638 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.57□□□□□ -2
RAD9AQ99638 AC010297.1-201ENST00000623948 149 ntBASIC2.57□□□□□ -2
RAD9AQ99638 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RAD9AQ99638 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.56□□□□□ -2
RAD9AQ99638 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.56□□□□□ -2
RAD9AQ99638 AL161431.1-201ENST00000618966 4205 ntBASIC2.56□□□□□ -2
RAD9AQ99638 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.56□□□□□ -2
RAD9AQ99638 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.56□□□□□ -2
RAD9AQ99638 Y_RNA.324-201ENST00000365165 102 ntBASIC2.56□□□□□ -2
RAD9AQ99638 Y_RNA.378-201ENST00000365652 113 ntBASIC2.56□□□□□ -2
RAD9AQ99638 RNU6-877P-201ENST00000383868 107 ntBASIC2.56□□□□□ -2
RAD9AQ99638 RNU6-1083P-201ENST00000384022 107 ntBASIC2.56□□□□□ -2
RAD9AQ99638 Y_RNA.480-201ENST00000384364 102 ntBASIC2.56□□□□□ -2
RAD9AQ99638 MIR514A2-201ENST00000385131 88 ntBASIC2.56□□□□□ -2
RAD9AQ99638 MIR514A3-201ENST00000385132 88 ntBASIC2.56□□□□□ -2
RAD9AQ99638 MIR1277-201ENST00000408536 78 ntBASIC2.56□□□□□ -2
RAD9AQ99638 SNRPEP10-201ENST00000420249 274 ntBASIC2.56□□□□□ -2
RAD9AQ99638 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.56□□□□□ -2
RAD9AQ99638 MTATP6P13-201ENST00000438531 667 ntBASIC2.56□□□□□ -2
RAD9AQ99638 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.56□□□□□ -2
RAD9AQ99638 AC107222.1-201ENST00000510899 637 ntBASIC2.56□□□□□ -2
RAD9AQ99638 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.56□□□□□ -2
RAD9AQ99638 SCARNA17.1-201ENST00000516211 143 ntBASIC2.56□□□□□ -2
RAD9AQ99638 SCARNA17.2-201ENST00000516334 143 ntBASIC2.56□□□□□ -2
RAD9AQ99638 RNU1-104P-201ENST00000517280 175 ntBASIC2.56□□□□□ -2
RAD9AQ99638 HSPE1P18-201ENST00000517602 280 ntBASIC2.56□□□□□ -2
RAD9AQ99638 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.56□□□□□ -2
RAD9AQ99638 AP004607.1-201ENST00000524456 203 ntBASIC2.56□□□□□ -2
RAD9AQ99638 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.56□□□□□ -2
RAD9AQ99638 OR11H5P-201ENST00000554039 926 ntBASIC2.56□□□□□ -2
RAD9AQ99638 AL356575.1-201ENST00000603008 283 ntBASIC2.56□□□□□ -2
RAD9AQ99638 SCARNA17.4-201ENST00000614296 143 ntBASIC2.56□□□□□ -2
RAD9AQ99638 AL353997.5-201ENST00000618886 171 ntBASIC2.56□□□□□ -2
RAD9AQ99638 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.56□□□□□ -2
RAD9AQ99638 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.56□□□□□ -2
RAD9AQ99638 AL160394.1-201ENST00000624765 724 ntBASIC2.56□□□□□ -2
RAD9AQ99638 SCARNA4-202ENST00000625402 129 ntBASIC2.56□□□□□ -2
RAD9AQ99638 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.56□□□□□ -2
RAD9AQ99638 AC024614.3-201ENST00000637860 256 ntBASIC2.56□□□□□ -2
RAD9AQ99638 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.56□□□□□ -2
RAD9AQ99638 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.56□□□□□ -2
RAD9AQ99638 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
RAD9AQ99638 RNU6-82P-201ENST00000363970 107 ntBASIC2.55□□□□□ -2
RAD9AQ99638 Y_RNA.231-201ENST00000364358 102 ntBASIC2.55□□□□□ -2
RAD9AQ99638 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.55□□□□□ -2
RAD9AQ99638 RNA5SP219-201ENST00000390940 113 ntBASIC2.55□□□□□ -2
RAD9AQ99638 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.55□□□□□ -2
RAD9AQ99638 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.55□□□□□ -2
RAD9AQ99638 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.55□□□□□ -2
RAD9AQ99638 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.55□□□□□ -2
RAD9AQ99638 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.55□□□□□ -2
RAD9AQ99638 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.55□□□□□ -2
RAD9AQ99638 AC006026.2-201ENST00000457376 180 ntBASIC2.55□□□□□ -2
RAD9AQ99638 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.55□□□□□ -2
RAD9AQ99638 TBCAP3-201ENST00000512475 312 ntBASIC2.55□□□□□ -2
RAD9AQ99638 Y_RNA.676-201ENST00000516393 96 ntBASIC2.55□□□□□ -2
RAD9AQ99638 Y_RNA.687-201ENST00000516558 91 ntBASIC2.55□□□□□ -2
RAD9AQ99638 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.55□□□□□ -2
RAD9AQ99638 AC090115.3-201ENST00000553218 849 ntBASIC2.55□□□□□ -2
RAD9AQ99638 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.55□□□□□ -2
RAD9AQ99638 AP000907.4-201ENST00000604143 237 ntBASIC2.55□□□□□ -2
RAD9AQ99638 RNU6-89P-201ENST00000606519 100 ntBASIC2.55□□□□□ -2
RAD9AQ99638 AC002044.1-201ENST00000606707 158 ntBASIC2.55□□□□□ -2
RAD9AQ99638 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.55□□□□□ -2
RAD9AQ99638 AC104237.2-201ENST00000612456 443 ntBASIC2.55□□□□□ -2
RAD9AQ99638 AC011890.2-201ENST00000613393 294 ntBASIC2.55□□□□□ -2
RAD9AQ99638 AC010378.1-201ENST00000619270 362 ntBASIC2.55□□□□□ -2
RAD9AQ99638 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.55□□□□□ -2
RAD9AQ99638 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.55□□□□□ -2
RAD9AQ99638 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
RAD9AQ99638 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.54□□□□□ -2
RAD9AQ99638 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
RAD9AQ99638 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.54□□□□□ -2
RAD9AQ99638 SNORA38-201ENST00000363946 132 ntBASIC2.54□□□□□ -2
RAD9AQ99638 RNU6-266P-201ENST00000364225 107 ntBASIC2.54□□□□□ -2
RAD9AQ99638 MIR147B-201ENST00000390185 80 ntBASIC2.54□□□□□ -2
RAD9AQ99638 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.54□□□□□ -2
RAD9AQ99638 POLHP1-201ENST00000411806 470 ntBASIC2.54□□□□□ -2
RAD9AQ99638 ARL5AP1-201ENST00000418991 388 ntBASIC2.54□□□□□ -2
RAD9AQ99638 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.54□□□□□ -2
RAD9AQ99638 ERLEC1P1-201ENST00000433806 578 ntBASIC2.54□□□□□ -2
RAD9AQ99638 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.54□□□□□ -2
RAD9AQ99638 Y_RNA.654-201ENST00000497848 106 ntBASIC2.54□□□□□ -2
RAD9AQ99638 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.54□□□□□ -2
RAD9AQ99638 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.54□□□□□ -2
RAD9AQ99638 RNU6-189P-201ENST00000516120 101 ntBASIC2.54□□□□□ -2
RAD9AQ99638 SNORA25.17-201ENST00000517184 124 ntBASIC2.54□□□□□ -2
RAD9AQ99638 AC078814.3-201ENST00000553036 491 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms