Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 Y_RNA.378-201ENST00000365652 113 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 RNU6-25P-201ENST00000383873 107 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 RNU6-1-201ENST00000383898 107 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 RNU6-48P-201ENST00000384161 107 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 RNU6-36P-201ENST00000384172 107 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 RNU6-4P-201ENST00000384205 107 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 Y_RNA.453-201ENST00000384223 109 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 RNU6-5P-201ENST00000384238 107 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 RNU6-3P-201ENST00000384314 107 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 RNU6-16P-201ENST00000384385 107 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 RNU6-15P-201ENST00000384534 107 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 RNU6-2-201ENST00000384627 107 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 RNU6-29P-201ENST00000384637 107 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 RNU6-9-201ENST00000384776 107 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 RNU6-33P-201ENST00000384793 107 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.42□□□□□ -2.02
CDCA3Q99618 HMGB1P31-201ENST00000437242 427 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 AL441985.1-201ENST00000457727 251 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 AC107626.1-201ENST00000471084 183 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 RNU5F-8P-201ENST00000515941 111 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 SNORA25.17-201ENST00000517184 124 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 AP004607.1-201ENST00000524456 203 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 OR11H5P-201ENST00000554039 926 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 AL670379.10-201ENST00000604330 253 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 AL670379.9-201ENST00000605428 253 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 RNU6-6P-201ENST00000606623 107 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 OR4G1P-203ENST00000641984 1631 ntBASIC2.42□□□□□ -2.02
CDCA3Q99618 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CDCA3Q99618 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.41□□□□□ -2.02
CDCA3Q99618 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CDCA3Q99618 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CDCA3Q99618 RNU6-266P-201ENST00000364225 107 ntBASIC2.41□□□□□ -2.02
CDCA3Q99618 RNU6-1328P-201ENST00000410938 106 ntBASIC2.41□□□□□ -2.02
CDCA3Q99618 OR9R1P-201ENST00000412200 877 ntBASIC2.41□□□□□ -2.02
CDCA3Q99618 EIF1P1-201ENST00000421436 341 ntBASIC2.41□□□□□ -2.02
CDCA3Q99618 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.41□□□□□ -2.02
CDCA3Q99618 Z98742.2-201ENST00000431564 187 ntBASIC2.41□□□□□ -2.02
CDCA3Q99618 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.41□□□□□ -2.02
CDCA3Q99618 AP001324.2-201ENST00000461163 319 ntBASIC2.41□□□□□ -2.02
CDCA3Q99618 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.41□□□□□ -2.02
CDCA3Q99618 AC091885.1-201ENST00000506658 268 ntBASIC2.41□□□□□ -2.02
CDCA3Q99618 SCARNA11.3-201ENST00000517276 130 ntBASIC2.41□□□□□ -2.02
CDCA3Q99618 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.41□□□□□ -2.02
CDCA3Q99618 CENPUP1-201ENST00000526649 1202 ntBASIC2.41□□□□□ -2.02
CDCA3Q99618 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.41□□□□□ -2.02
CDCA3Q99618 AC090115.3-201ENST00000553218 849 ntBASIC2.41□□□□□ -2.02
CDCA3Q99618 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.41□□□□□ -2.02
CDCA3Q99618 VN1R80P-201ENST00000597126 338 ntBASIC2.41□□□□□ -2.02
CDCA3Q99618 AC008121.1-201ENST00000603244 268 ntBASIC2.41□□□□□ -2.02
CDCA3Q99618 RMST_7.1-201ENST00000621935 268 ntBASIC2.41□□□□□ -2.02
CDCA3Q99618 SCARNA4-202ENST00000625402 129 ntBASIC2.41□□□□□ -2.02
CDCA3Q99618 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.41□□□□□ -2.02
CDCA3Q99618 MIR3688-2-201ENST00000636963 87 ntBASIC2.41□□□□□ -2.02
CDCA3Q99618 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CDCA3Q99618 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
CDCA3Q99618 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CDCA3Q99618 Y_RNA.89-201ENST00000363031 102 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 RNY3P3-201ENST00000363816 102 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 RNU6-748P-201ENST00000384648 107 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.4□□□□□ -2.03
CDCA3Q99618 POLHP1-201ENST00000411806 470 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.4□□□□□ -2.03
CDCA3Q99618 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.4□□□□□ -2.03
CDCA3Q99618 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.4□□□□□ -2.03
CDCA3Q99618 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.4□□□□□ -2.03
CDCA3Q99618 AC012308.1-201ENST00000451232 178 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.4□□□□□ -2.03
CDCA3Q99618 HMGN2P23-201ENST00000456759 269 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 AC087884.1-201ENST00000469738 328 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 RN7SL297P-201ENST00000483161 293 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 CKS1BP2-201ENST00000497342 240 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 RPL38P4-201ENST00000502376 214 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CDCA3Q99618 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.4□□□□□ -2.03
CDCA3Q99618 AC116337.1-201ENST00000509680 687 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 SNORA43.2-201ENST00000516652 128 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 CR383656.8-201ENST00000549046 145 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 AC103810.1-201ENST00000579873 453 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 OR1M4P-201ENST00000589199 287 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 AC092747.3-201ENST00000603769 301 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 RNU6-89P-201ENST00000606519 100 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.4□□□□□ -2.03
CDCA3Q99618 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.4□□□□□ -2.03
CDCA3Q99618 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.4□□□□□ -2.03
CDCA3Q99618 Z69720.2-201ENST00000624755 279 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 AC024614.3-201ENST00000637860 256 ntBASIC2.4□□□□□ -2.03
CDCA3Q99618 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.4□□□□□ -2.03
CDCA3Q99618 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.4□□□□□ -2.03
CDCA3Q99618 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CDCA3Q99618 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CDCA3Q99618 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CDCA3Q99618 RNU6-451P-201ENST00000362921 107 ntBASIC2.39□□□□□ -2.03
CDCA3Q99618 RNU6-82P-201ENST00000363970 107 ntBASIC2.39□□□□□ -2.03
CDCA3Q99618 Y_RNA.231-201ENST00000364358 102 ntBASIC2.39□□□□□ -2.03
CDCA3Q99618 Y_RNA.295-201ENST00000364918 102 ntBASIC2.39□□□□□ -2.03
CDCA3Q99618 RNU5E-7P-201ENST00000365290 117 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 207.4 ms