Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 7SK.13-201ENST00000622040 250 ntBASIC-0.77□□□□□ -2.53
VPS13AQ96RL7 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC-0.77□□□□□ -2.53
VPS13AQ96RL7 AL606662.1-201ENST00000445763 553 ntBASIC-0.77□□□□□ -2.53
VPS13AQ96RL7 AC104057.1-201ENST00000515547 497 ntBASIC-0.77□□□□□ -2.53
VPS13AQ96RL7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC-0.77□□□□□ -2.53
VPS13AQ96RL7 AC117490.2-201ENST00000610042 594 ntBASIC-0.77□□□□□ -2.53
VPS13AQ96RL7 AC040168.1-201ENST00000623594 991 ntBASIC-0.77□□□□□ -2.53
VPS13AQ96RL7 SNORD1A-201ENST00000364968 72 ntBASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 AC244098.3-201ENST00000424803 96 ntBASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 RPS15AP10-201ENST00000432472 382 ntBASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 MIR892C-201ENST00000516410 77 ntBASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 AC016716.1-201ENST00000265882 708 ntBASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 MIR412-201ENST00000362142 91 ntBASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 AC010587.2-201ENST00000511727 448 ntBASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 AC105148.1-201ENST00000604961 409 ntBASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 RNU6-950P-201ENST00000384651 107 ntBASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 UBE2V1P4-201ENST00000425374 344 ntBASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 ZNF886P-201ENST00000450781 723 ntBASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 RNU7-56P-201ENST00000458744 62 ntBASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 AC093303.1-201ENST00000514549 295 ntBASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 AL356432.3-201ENST00000568952 465 ntBASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 MIR4743-201ENST00000584576 69 ntBASIC-0.78□□□□□ -2.53
VPS13AQ96RL7 TRGV6-201ENST00000417928 299 ntBASIC-0.79□□□□□ -2.54
VPS13AQ96RL7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC-0.79□□□□□ -2.54
VPS13AQ96RL7 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.79□□□□□ -2.54
VPS13AQ96RL7 AC067904.2-201ENST00000517322 1283 ntBASIC-0.79□□□□□ -2.54
VPS13AQ96RL7 AC005176.2-201ENST00000596933 147 ntBASIC-0.79□□□□□ -2.54
VPS13AQ96RL7 AC063976.4-201ENST00000421971 163 ntBASIC-0.8□□□□□ -2.54
VPS13AQ96RL7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.8□□□□□ -2.54
VPS13AQ96RL7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.8□□□□□ -2.54
VPS13AQ96RL7 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.8□□□□□ -2.54
VPS13AQ96RL7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.8□□□□□ -2.54
VPS13AQ96RL7 AC108729.1-201ENST00000487812 947 ntBASIC-0.8□□□□□ -2.54
VPS13AQ96RL7 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.8□□□□□ -2.54
VPS13AQ96RL7 AC023632.1-201ENST00000518463 375 ntBASIC-0.8□□□□□ -2.54
VPS13AQ96RL7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC-0.8□□□□□ -2.54
VPS13AQ96RL7 AL360219.1-201ENST00000610230 366 ntBASIC-0.8□□□□□ -2.54
VPS13AQ96RL7 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.8□□□□□ -2.54
VPS13AQ96RL7 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC-0.8□□□□□ -2.54
VPS13AQ96RL7 AL161629.2-201ENST00000615347 275 ntBASIC-0.8□□□□□ -2.54
VPS13AQ96RL7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.81□□□□□ -2.54
VPS13AQ96RL7 USP9YP19-201ENST00000412165 485 ntBASIC-0.81□□□□□ -2.54
VPS13AQ96RL7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.81□□□□□ -2.54
VPS13AQ96RL7 AL353765.1-201ENST00000605514 183 ntBASIC-0.81□□□□□ -2.54
VPS13AQ96RL7 Z99571.1-201ENST00000636677 394 ntBASIC-0.81□□□□□ -2.54
VPS13AQ96RL7 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.81□□□□□ -2.54
VPS13AQ96RL7 RNU2-49P-201ENST00000410666 184 ntBASIC-0.81□□□□□ -2.54
VPS13AQ96RL7 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC-0.81□□□□□ -2.54
VPS13AQ96RL7 AC025465.3-201ENST00000510570 311 ntBASIC-0.81□□□□□ -2.54
VPS13AQ96RL7 ELOCP32-201ENST00000548625 324 ntBASIC-0.81□□□□□ -2.54
VPS13AQ96RL7 MIR4432-201ENST00000581823 84 ntBASIC-0.81□□□□□ -2.54
VPS13AQ96RL7 AC010900.2-201ENST00000604508 210 ntBASIC-0.81□□□□□ -2.54
VPS13AQ96RL7 AL355073.2-201ENST00000612106 557 ntBASIC-0.81□□□□□ -2.54
VPS13AQ96RL7 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC-0.81□□□□□ -2.54
VPS13AQ96RL7 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.81□□□□□ -2.54
VPS13AQ96RL7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 AC010186.2-204ENST00000537668 439 ntBASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 MIR593-201ENST00000384856 100 ntBASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 AC004865.1-201ENST00000442276 1003 ntBASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 RN7SKP5-201ENST00000517045 272 ntBASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 AC092268.1-201ENST00000342691 405 ntBASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 AL953862.1-201ENST00000423016 168 ntBASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 AC022616.8-201ENST00000533569 253 ntBASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 SUMO2P14-201ENST00000604488 293 ntBASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 AL133445.2-201ENST00000611191 527 ntBASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 AC020923.1-201ENST00000624021 917 ntBASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 AC009033.1-201ENST00000624279 431 ntBASIC-0.82□□□□□ -2.54
VPS13AQ96RL7 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.83□□□□□ -2.54
VPS13AQ96RL7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
VPS13AQ96RL7 HMGN2P26-201ENST00000463169 339 ntBASIC-0.83□□□□□ -2.54
VPS13AQ96RL7 AC107027.2-201ENST00000512197 115 ntBASIC-0.83□□□□□ -2.54
VPS13AQ96RL7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC-0.83□□□□□ -2.54
VPS13AQ96RL7 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.83□□□□□ -2.54
VPS13AQ96RL7 MTND4P4-201ENST00000439033 1366 ntBASIC-0.83□□□□□ -2.54
VPS13AQ96RL7 RNY1P8-201ENST00000383970 114 ntBASIC-0.83□□□□□ -2.54
VPS13AQ96RL7 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.83□□□□□ -2.54
VPS13AQ96RL7 RNU6-732P-201ENST00000516033 103 ntBASIC-0.83□□□□□ -2.54
VPS13AQ96RL7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC-0.83□□□□□ -2.54
VPS13AQ96RL7 AC027104.1-201ENST00000563702 681 ntBASIC-0.83□□□□□ -2.54
VPS13AQ96RL7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.83□□□□□ -2.54
VPS13AQ96RL7 MIR4263-201ENST00000584745 83 ntBASIC-0.83□□□□□ -2.54
VPS13AQ96RL7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 MTCO1P44-201ENST00000441935 243 ntBASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 KATNBL1P6-201ENST00000453433 915 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms