Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 AC091135.1-201ENST00000585943 307 ntBASIC1.95□□□□□ -2.1
VPS35Q96QK1 AL096840.1-201ENST00000603287 93 ntBASIC1.95□□□□□ -2.1
VPS35Q96QK1 AL590229.1-201ENST00000603497 542 ntBASIC1.95□□□□□ -2.1
VPS35Q96QK1 SNRPGP17-201ENST00000603780 214 ntBASIC1.95□□□□□ -2.1
VPS35Q96QK1 AL136363.2-201ENST00000604173 851 ntBASIC1.95□□□□□ -2.1
VPS35Q96QK1 AC109347.2-201ENST00000610220 349 ntBASIC1.95□□□□□ -2.1
VPS35Q96QK1 AC099842.1-201ENST00000619919 596 ntBASIC1.95□□□□□ -2.1
VPS35Q96QK1 AC097372.5-201ENST00000623665 376 ntBASIC1.95□□□□□ -2.1
VPS35Q96QK1 AC009161.2-201ENST00000624626 138 ntBASIC1.95□□□□□ -2.1
VPS35Q96QK1 U4.7-201ENST00000638126 106 ntBASIC1.95□□□□□ -2.1
VPS35Q96QK1 AL390237.1-201ENST00000404226 1415 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 snoU2_19.1-201ENST00000362361 80 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 RNU6-527P-201ENST00000363425 104 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 RNU6-944P-201ENST00000364023 107 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 U3.13-201ENST00000364804 214 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 MIR29B2-201ENST00000385055 81 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
VPS35Q96QK1 GSTA9P-201ENST00000406231 611 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.94□□□□□ -2.1
VPS35Q96QK1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.94□□□□□ -2.1
VPS35Q96QK1 RPL39P29-201ENST00000447779 157 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 MTND1P18-201ENST00000448191 573 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 AL353752.1-201ENST00000454946 260 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 C1DP4-201ENST00000455429 424 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 AC006512.1-201ENST00000468816 291 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 UBL5P3-201ENST00000475112 231 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 BET1P1-201ENST00000482276 359 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.94□□□□□ -2.1
VPS35Q96QK1 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.94□□□□□ -2.1
VPS35Q96QK1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.94□□□□□ -2.1
VPS35Q96QK1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.94□□□□□ -2.1
VPS35Q96QK1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.94□□□□□ -2.1
VPS35Q96QK1 CYCSP27-201ENST00000527643 293 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.94□□□□□ -2.1
VPS35Q96QK1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.94□□□□□ -2.1
VPS35Q96QK1 AC068790.2-201ENST00000602601 557 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 AC078795.2-201ENST00000602835 1252 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 AC072046.2-201ENST00000618366 268 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 uc_338.11-201ENST00000619132 160 ntBASIC1.94□□□□□ -2.1
VPS35Q96QK1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.94□□□□□ -2.1
VPS35Q96QK1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
VPS35Q96QK1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
VPS35Q96QK1 AP000568.1-201ENST00000282964 442 ntBASIC1.93□□□□□ -2.1
VPS35Q96QK1 RNU6-546P-201ENST00000383991 107 ntBASIC1.93□□□□□ -2.1
VPS35Q96QK1 MIR518A2-201ENST00000384966 87 ntBASIC1.93□□□□□ -2.1
VPS35Q96QK1 RNU2-48P-201ENST00000410694 191 ntBASIC1.93□□□□□ -2.1
VPS35Q96QK1 AL358934.1-201ENST00000432346 324 ntBASIC1.93□□□□□ -2.1
VPS35Q96QK1 snoU13.15-201ENST00000459407 104 ntBASIC1.93□□□□□ -2.1
VPS35Q96QK1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS35Q96QK1 RPL30P1-201ENST00000488676 339 ntBASIC1.93□□□□□ -2.1
VPS35Q96QK1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VPS35Q96QK1 Y_RNA.695-201ENST00000516715 107 ntBASIC1.93□□□□□ -2.1
VPS35Q96QK1 RNU6-430P-201ENST00000517078 107 ntBASIC1.93□□□□□ -2.1
VPS35Q96QK1 AC007834.2-201ENST00000536310 343 ntBASIC1.93□□□□□ -2.1
VPS35Q96QK1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS35Q96QK1 SUB1P2-201ENST00000556401 297 ntBASIC1.93□□□□□ -2.1
VPS35Q96QK1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS35Q96QK1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS35Q96QK1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.93□□□□□ -2.1
VPS35Q96QK1 AC004908.3-201ENST00000610248 625 ntBASIC1.93□□□□□ -2.1
VPS35Q96QK1 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
VPS35Q96QK1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS35Q96QK1 AC022418.1-201ENST00000624118 445 ntBASIC1.93□□□□□ -2.1
VPS35Q96QK1 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.93□□□□□ -2.1
VPS35Q96QK1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
VPS35Q96QK1 RNU6-37P-201ENST00000362692 107 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-1159P-201ENST00000362933 107 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-105P-201ENST00000363909 104 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-11P-201ENST00000364234 107 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-25P-201ENST00000383873 107 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-1-201ENST00000383898 107 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-48P-201ENST00000384161 107 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-36P-201ENST00000384172 107 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-4P-201ENST00000384205 107 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-5P-201ENST00000384238 107 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-3P-201ENST00000384314 107 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-16P-201ENST00000384385 107 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-15P-201ENST00000384534 107 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-2-201ENST00000384627 107 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-29P-201ENST00000384637 107 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-606P-201ENST00000384721 111 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-9-201ENST00000384776 107 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-33P-201ENST00000384793 107 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 AC019129.1-201ENST00000403786 261 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU2-9P-201ENST00000410194 145 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 USP9YP18-201ENST00000425912 695 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 AL121890.1-201ENST00000435457 205 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.92□□□□□ -2.1
VPS35Q96QK1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.92□□□□□ -2.1
VPS35Q96QK1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.92□□□□□ -2.1
VPS35Q96QK1 MTCO3P7-201ENST00000510008 774 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.92□□□□□ -2.1
VPS35Q96QK1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
VPS35Q96QK1 AC022616.8-201ENST00000533569 253 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.92□□□□□ -2.1
VPS35Q96QK1 MIR4287-201ENST00000579398 78 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 AC008088.1-201ENST00000580993 280 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 RNU6-6P-201ENST00000606623 107 ntBASIC1.92□□□□□ -2.1
VPS35Q96QK1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms