Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 RNA5SP252-201ENST00000391131 119 ntBASIC3.4□□□□□ -1.87
NEIL1Q96FI4 MIR888-201ENST00000401186 77 ntBASIC3.4□□□□□ -1.87
NEIL1Q96FI4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.4□□□□□ -1.87
NEIL1Q96FI4 AL117339.2-201ENST00000430475 180 ntBASIC3.4□□□□□ -1.87
NEIL1Q96FI4 HMGB3P8-201ENST00000449709 577 ntBASIC3.4□□□□□ -1.87
NEIL1Q96FI4 MTATP6P7-201ENST00000453315 681 ntBASIC3.4□□□□□ -1.87
NEIL1Q96FI4 AC010099.1-201ENST00000455434 375 ntBASIC3.4□□□□□ -1.87
NEIL1Q96FI4 AC087477.1-201ENST00000465747 340 ntBASIC3.4□□□□□ -1.87
NEIL1Q96FI4 RPL23AP14-201ENST00000468281 468 ntBASIC3.4□□□□□ -1.87
NEIL1Q96FI4 BTF3L4P4-201ENST00000506381 449 ntBASIC3.4□□□□□ -1.87
NEIL1Q96FI4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.4□□□□□ -1.87
NEIL1Q96FI4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.4□□□□□ -1.87
NEIL1Q96FI4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.4□□□□□ -1.87
NEIL1Q96FI4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NEIL1Q96FI4 MIR7151-201ENST00000617477 60 ntBASIC3.4□□□□□ -1.87
NEIL1Q96FI4 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.4□□□□□ -1.87
NEIL1Q96FI4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NEIL1Q96FI4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NEIL1Q96FI4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.4□□□□□ -1.87
NEIL1Q96FI4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
NEIL1Q96FI4 FAM35DP-201ENST00000323387 2712 ntBASIC3.4□□□□□ -1.87
NEIL1Q96FI4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
NEIL1Q96FI4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NEIL1Q96FI4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NEIL1Q96FI4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
NEIL1Q96FI4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.39□□□□□ -1.87
NEIL1Q96FI4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.39□□□□□ -1.87
NEIL1Q96FI4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NEIL1Q96FI4 RNA5SP361-201ENST00000362686 118 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 RNU6-270P-201ENST00000364131 105 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 Y_RNA.286-201ENST00000364813 102 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 U1.1-201ENST00000384101 164 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 SNORA29-201ENST00000384183 140 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 UBA52P6-201ENST00000399822 382 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 AL033519.2-201ENST00000403958 392 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.39□□□□□ -1.87
NEIL1Q96FI4 AL159169.1-201ENST00000421119 127 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 AL691449.1-201ENST00000426570 421 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 RPL37P4-201ENST00000448908 268 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 AL031183.1-201ENST00000457667 207 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 RNU7-120P-201ENST00000459334 63 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 AC107393.1-201ENST00000512403 346 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 RNU6-1114P-201ENST00000516022 107 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 RNU7-143P-201ENST00000516781 65 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 RNU6-255P-201ENST00000516957 105 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 MIR4286-201ENST00000580651 93 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 MIR486-1-201ENST00000612171 68 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.39□□□□□ -1.87
NEIL1Q96FI4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.39□□□□□ -1.87
NEIL1Q96FI4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NEIL1Q96FI4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NEIL1Q96FI4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
NEIL1Q96FI4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.39□□□□□ -1.87
NEIL1Q96FI4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 ZNF826P-207ENST00000622273 1910 ntBASIC3.38□□□□□ -1.87
NEIL1Q96FI4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 MIR372-201ENST00000362225 67 ntBASIC3.38□□□□□ -1.87
NEIL1Q96FI4 Y_RNA.44-201ENST00000362676 108 ntBASIC3.38□□□□□ -1.87
NEIL1Q96FI4 RNU6-884P-201ENST00000363889 107 ntBASIC3.38□□□□□ -1.87
NEIL1Q96FI4 SNORD32A-201ENST00000364805 84 ntBASIC3.38□□□□□ -1.87
NEIL1Q96FI4 RNU1-64P-201ENST00000365443 163 ntBASIC3.38□□□□□ -1.87
NEIL1Q96FI4 RNA5SP283-201ENST00000365604 119 ntBASIC3.38□□□□□ -1.87
NEIL1Q96FI4 RNU6-662P-201ENST00000384253 104 ntBASIC3.38□□□□□ -1.87
NEIL1Q96FI4 Y_RNA.504-201ENST00000384481 104 ntBASIC3.38□□□□□ -1.87
NEIL1Q96FI4 SNORD116-20-201ENST00000384529 92 ntBASIC3.38□□□□□ -1.87
NEIL1Q96FI4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 SNORD12B-201ENST00000410433 91 ntBASIC3.38□□□□□ -1.87
NEIL1Q96FI4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 RPL26P9-201ENST00000457466 433 ntBASIC3.38□□□□□ -1.87
NEIL1Q96FI4 AC024405.2-202ENST00000532731 184 ntBASIC3.38□□□□□ -1.87
NEIL1Q96FI4 AP002392.1-201ENST00000537692 208 ntBASIC3.38□□□□□ -1.87
NEIL1Q96FI4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 AC110741.2-201ENST00000605278 268 ntBASIC3.38□□□□□ -1.87
NEIL1Q96FI4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 SNORA43.4-201ENST00000629559 138 ntBASIC3.38□□□□□ -1.87
NEIL1Q96FI4 AL353743.1-202ENST00000431724 1695 ntBASIC3.38□□□□□ -1.87
NEIL1Q96FI4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NEIL1Q96FI4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.37□□□□□ -1.87
NEIL1Q96FI4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.37□□□□□ -1.87
NEIL1Q96FI4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NEIL1Q96FI4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NEIL1Q96FI4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.37□□□□□ -1.87
NEIL1Q96FI4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
NEIL1Q96FI4 RN7SKP280-201ENST00000364196 304 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 RNA5SP515-201ENST00000364570 118 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 SNORA14A-201ENST00000364773 135 ntBASIC3.37□□□□□ -1.87
NEIL1Q96FI4 RNU1-73P-201ENST00000383971 164 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms