Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 GNAI2P1-201ENST00000541815 315 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 AC010653.1-201ENST00000571108 881 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 AL162713.1-201ENST00000604480 262 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 AC116312.1-201ENST00000606841 314 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 AC005014.2-201ENST00000607795 599 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 AL079305.1-201ENST00000623159 3008 ntBASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.02□□□□□ -1.93
CTHRC1Q96CG8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 HAUS6P2-201ENST00000433254 2404 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 SNORD50.1-201ENST00000362987 71 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 Y_RNA.158-201ENST00000363651 101 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 RNU6-595P-201ENST00000363944 107 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 RNU6-99P-201ENST00000364721 107 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 RNU6-19P-201ENST00000384718 107 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 AL357075.1-201ENST00000404107 726 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 RNU6-1156P-201ENST00000410365 100 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 AC007098.1-201ENST00000420122 367 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 MTCYBP10-201ENST00000424905 650 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 AL160004.2-201ENST00000432935 350 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 AL353705.1-201ENST00000433468 480 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 RPS4XP22-201ENST00000480755 780 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 RNU7-4P-201ENST00000516961 62 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 SNORD19.2-201ENST00000516978 73 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 ACA59.2-201ENST00000517061 156 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 RNU6-711P-201ENST00000517255 106 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 AP000889.1-201ENST00000530968 660 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 MIR5195-201ENST00000583555 115 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 AC008737.2-201ENST00000599446 118 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 AL158827.2-201ENST00000602494 330 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 AC092447.9-201ENST00000603395 144 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 YPEL5P2-201ENST00000605553 359 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 AL162730.1-201ENST00000605734 292 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 AC009318.2-201ENST00000610917 651 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 AC007485.1-201ENST00000616755 206 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 AC091925.1-201ENST00000623204 462 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 AL691447.3-201ENST00000635020 330 ntBASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
CTHRC1Q96CG8 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CTHRC1Q96CG8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CTHRC1Q96CG8 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3□□□□□ -1.93
CTHRC1Q96CG8 AL355596.1-201ENST00000565399 3996 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3□□□□□ -1.93
CTHRC1Q96CG8 Y_RNA.39-201ENST00000362620 98 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 RNU6-843P-201ENST00000384454 104 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 MIR625-201ENST00000385047 85 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 RNU2-23P-201ENST00000410545 195 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 AC023141.4-201ENST00000412031 328 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3□□□□□ -1.93
CTHRC1Q96CG8 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3□□□□□ -1.93
CTHRC1Q96CG8 PTGES3P4-201ENST00000426243 356 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 TRIAP1P1-201ENST00000427062 225 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 RPS3AP12-201ENST00000443616 753 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3□□□□□ -1.93
CTHRC1Q96CG8 BX510359.1-201ENST00000456973 237 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 AL031183.1-201ENST00000457667 207 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 RN7SKP210-201ENST00000459176 261 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 AC107626.1-201ENST00000471084 183 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 RNU1-143P-201ENST00000516296 146 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 SNORA31.21-201ENST00000517180 77 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 AC144568.1-201ENST00000520139 137 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3□□□□□ -1.93
CTHRC1Q96CG8 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3□□□□□ -1.93
CTHRC1Q96CG8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3□□□□□ -1.93
CTHRC1Q96CG8 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3□□□□□ -1.93
CTHRC1Q96CG8 U1.23-201ENST00000610293 146 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 RNU1-68P-201ENST00000615382 146 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 MIR7112-201ENST00000616126 65 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 U1.39-201ENST00000621562 146 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 MIR3651-201ENST00000630427 90 ntBASIC3□□□□□ -1.93
CTHRC1Q96CG8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3□□□□□ -1.93
CTHRC1Q96CG8 MTND4P1-201ENST00000457501 1466 ntBASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 RNU6-142P-201ENST00000384019 107 ntBASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 U3.19-201ENST00000390893 196 ntBASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 AL138885.1-201ENST00000405921 675 ntBASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 MTCYBP2-201ENST00000407745 171 ntBASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 RNA5SP390-201ENST00000410191 113 ntBASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 RNU4-47P-201ENST00000410876 114 ntBASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 EIF1AXP1-201ENST00000419267 435 ntBASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 RPL23AP83-201ENST00000434984 473 ntBASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.99□□□□□ -1.93
CTHRC1Q96CG8 AC115115.1-201ENST00000449927 248 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 233.9 ms