Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RPL17P50-201ENST00000396131 546 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.33□□□□□ -2.04
VPS33AQ96AX1 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 ARL5AP1-201ENST00000418991 388 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AL590556.1-201ENST00000423231 483 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 SNAP23P1-201ENST00000433229 246 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AC107083.1-201ENST00000439643 279 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS33AQ96AX1 MTND1P1-201ENST00000445453 368 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.33□□□□□ -2.04
VPS33AQ96AX1 SNORD109B-201ENST00000458961 67 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 SNORD109A-201ENST00000459128 67 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AK3P2-201ENST00000507976 429 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.33□□□□□ -2.04
VPS33AQ96AX1 RNU5F-2P-201ENST00000516066 82 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 Y_RNA.693-201ENST00000516641 110 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 RNU6-835P-201ENST00000516974 104 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 SNORA31.25-201ENST00000517242 134 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AC022616.8-201ENST00000533569 253 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AC026271.5-201ENST00000577873 130 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AC103987.3-201ENST00000582071 292 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 MIR3136-201ENST00000583498 78 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 SNRPGP17-201ENST00000603780 214 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AC107304.1-201ENST00000604229 296 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AL033523.1-201ENST00000605153 153 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AC103591.3-201ENST00000608684 209 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS33AQ96AX1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VPS33AQ96AX1 snoU2_19.1-201ENST00000362361 80 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 RNU6-38P-201ENST00000384085 107 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 RNU6-692P-201ENST00000384496 107 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 RNU6-1106P-201ENST00000390845 107 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 SNORA48.2-201ENST00000390926 124 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 CALM2P3-201ENST00000400429 449 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 RNU6-648P-201ENST00000410190 107 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 RNU2-32P-201ENST00000411193 191 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 POLHP1-201ENST00000411806 470 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 MORF4L1P6-201ENST00000418771 268 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS33AQ96AX1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS33AQ96AX1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS33AQ96AX1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS33AQ96AX1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS33AQ96AX1 RPL32P28-201ENST00000443577 397 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS33AQ96AX1 TPTE2P5-203ENST00000458118 728 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 RNU6-333P-201ENST00000459117 107 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 AC087884.1-201ENST00000469738 328 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS33AQ96AX1 RNU6-667P-201ENST00000517186 102 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS33AQ96AX1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS33AQ96AX1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS33AQ96AX1 AC233702.2-202ENST00000562547 291 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS33AQ96AX1 AC078899.2-201ENST00000595282 212 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS33AQ96AX1 YWHAEP7-203ENST00000622054 312 ntBASIC2.32□□□□□ -2.04
VPS33AQ96AX1 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS33AQ96AX1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS33AQ96AX1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS33AQ96AX1 RNU4-66P-201ENST00000365199 138 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 RNU6-611P-201ENST00000384276 104 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 RNU6-43P-201ENST00000384302 107 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 MIR27B-201ENST00000385129 97 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
VPS33AQ96AX1 SNORA40.19-201ENST00000390846 128 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 RN7SKP61-201ENST00000410642 295 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 RNU2-48P-201ENST00000410694 191 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 HMGB3P2-201ENST00000411913 584 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 CBX3P6-201ENST00000430257 527 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 ARL5AP4-201ENST00000430731 512 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.31□□□□□ -2.04
VPS33AQ96AX1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS33AQ96AX1 Y_RNA.654-201ENST00000497848 106 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 HMGB1P35-201ENST00000503360 598 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS33AQ96AX1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS33AQ96AX1 RN7SKP24-201ENST00000515888 284 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 RNA5SP320-201ENST00000516263 124 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.31□□□□□ -2.04
VPS33AQ96AX1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS33AQ96AX1 AC103996.1-201ENST00000555468 102 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 MIR4529-201ENST00000578110 78 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 AL031274.2-201ENST00000599419 203 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 AL034555.1-201ENST00000604816 211 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 U4.3-201ENST00000621047 82 ntBASIC2.31□□□□□ -2.04
VPS33AQ96AX1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
VPS33AQ96AX1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS33AQ96AX1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS33AQ96AX1 RNU6-525P-201ENST00000363685 104 ntBASIC2.3□□□□□ -2.04
VPS33AQ96AX1 RNU6-944P-201ENST00000364023 107 ntBASIC2.3□□□□□ -2.04
VPS33AQ96AX1 SNORD114-30-201ENST00000364448 72 ntBASIC2.3□□□□□ -2.04
VPS33AQ96AX1 SNORD32A-201ENST00000364805 84 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms