Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 RNU6-682P-201ENST00000363843 106 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 RNY4P28-201ENST00000365281 93 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 RNU6-142P-201ENST00000384019 107 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 RNU6-662P-201ENST00000384253 104 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 MIR544A-201ENST00000384855 91 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 RNU6-159P-201ENST00000391080 106 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 MIR888-201ENST00000401186 77 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 AL591034.1-201ENST00000407447 340 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 RPS4XP22-201ENST00000480755 780 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 RPS29P20-201ENST00000489592 171 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 RNA5SP154-201ENST00000516193 111 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 RNU6-58P-201ENST00000517143 103 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 SNORA31.23-201ENST00000517219 133 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 AC016256.1-201ENST00000547971 354 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 AK6P2-201ENST00000549020 471 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 HSPE1P4-201ENST00000550617 308 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 MIR3133-201ENST00000583157 78 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 AC010620.2-201ENST00000600135 313 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 AL356157.2-201ENST00000605122 111 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 AL121772.2-201ENST00000614331 297 ntBASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VTI1AQ96AJ9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 AC135776.4-201ENST00000624300 1904 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 RNU6-525P-201ENST00000363685 104 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 RNU6-961P-201ENST00000363893 105 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 Y_RNA.569-201ENST00000384749 103 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 MIR329-1-201ENST00000385028 80 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 HLFP1-201ENST00000402375 499 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 RNA5SP104-201ENST00000410989 118 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 RNU5A-5P-201ENST00000411054 116 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 AL160275.2-201ENST00000412010 394 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 COX6CP10-201ENST00000416832 224 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 YPEL5P1-201ENST00000419731 367 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 SNORA25.14-201ENST00000516481 132 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 Y_RNA.683-201ENST00000516508 93 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 RNU7-110P-201ENST00000516891 62 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 RNU6-1212P-201ENST00000517023 104 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 AC087441.2-201ENST00000529141 262 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 AL451007.1-201ENST00000595491 289 ntBASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.6□□□□□ -1.67
VTI1AQ96AJ9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 MIR448-201ENST00000362131 111 ntBASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 RNU6-858P-201ENST00000362436 107 ntBASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 SNORA63.1-201ENST00000362493 131 ntBASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 Y_RNA.122-201ENST00000363331 96 ntBASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 RNU6-626P-201ENST00000363354 107 ntBASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 SNORA1.3-201ENST00000384676 136 ntBASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 Y_RNA.570-201ENST00000384750 101 ntBASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 MIR30B-201ENST00000384850 88 ntBASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 RPL23AP83-201ENST00000434984 473 ntBASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 SETP5-201ENST00000437270 562 ntBASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 AC006011.1-201ENST00000442758 349 ntBASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 GPM6BP3-201ENST00000442797 145 ntBASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 AC006517.1-201ENST00000480485 328 ntBASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 MIR3910-1-201ENST00000580936 111 ntBASIC4.59□□□□□ -1.67
VTI1AQ96AJ9 AL162424.1-201ENST00000602325 221 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms