Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.71□□□□□ -1.82
ERCC4Q92889 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.71□□□□□ -1.82
ERCC4Q92889 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.71□□□□□ -1.82
ERCC4Q92889 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.71□□□□□ -1.82
ERCC4Q92889 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.71□□□□□ -1.82
ERCC4Q92889 RPS26P21-201ENST00000475397 348 ntBASIC3.71□□□□□ -1.82
ERCC4Q92889 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.71□□□□□ -1.82
ERCC4Q92889 RN7SKP282-201ENST00000516824 299 ntBASIC3.71□□□□□ -1.82
ERCC4Q92889 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.71□□□□□ -1.82
ERCC4Q92889 LINC00933-203ENST00000559812 219 ntBASIC3.71□□□□□ -1.82
ERCC4Q92889 MIR3149-201ENST00000584629 83 ntBASIC3.71□□□□□ -1.82
ERCC4Q92889 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.71□□□□□ -1.82
ERCC4Q92889 U3.45-201ENST00000607547 219 ntBASIC3.71□□□□□ -1.82
ERCC4Q92889 HMGB1P24-202ENST00000615653 685 ntBASIC3.71□□□□□ -1.82
ERCC4Q92889 MIR6076-201ENST00000617521 113 ntBASIC3.71□□□□□ -1.82
ERCC4Q92889 AL138825.1-201ENST00000618587 192 ntBASIC3.71□□□□□ -1.82
ERCC4Q92889 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
ERCC4Q92889 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ERCC4Q92889 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
ERCC4Q92889 CDC27P3-201ENST00000635418 1910 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 AL356274.2-201ENST00000624379 3752 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 Y_RNA.106-201ENST00000363189 100 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 RNU6-105P-201ENST00000363909 104 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 Y_RNA.380-201ENST00000365663 111 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 SNORA1.3-201ENST00000384676 136 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 MIR7-3-201ENST00000384898 110 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 RPS4XP3-201ENST00000398541 413 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 AC114482.1-201ENST00000418010 247 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 HMGN2P31-201ENST00000432430 273 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.7□□□□□ -1.82
ERCC4Q92889 AC115115.1-201ENST00000449927 248 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 RBMY2UP-201ENST00000453474 324 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 AC010655.3-201ENST00000478818 450 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.7□□□□□ -1.82
ERCC4Q92889 AC093852.1-201ENST00000503587 266 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.7□□□□□ -1.82
ERCC4Q92889 RNU7-4P-201ENST00000516961 62 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.7□□□□□ -1.82
ERCC4Q92889 AC007458.1-201ENST00000542812 373 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 MIR5188-201ENST00000583467 113 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.7□□□□□ -1.82
ERCC4Q92889 AC016727.2-201ENST00000603988 621 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 Z98751.3-201ENST00000604447 521 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 AL021879.1-201ENST00000611756 288 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 MIR6134-201ENST00000617606 109 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
ERCC4Q92889 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 AC017071.1-201ENST00000564407 2204 ntBASIC3.7□□□□□ -1.82
ERCC4Q92889 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
ERCC4Q92889 RNU6-227P-201ENST00000362865 103 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 Y_RNA.193-201ENST00000363979 102 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 RNU6-270P-201ENST00000364131 105 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 Y_RNA.389-201ENST00000383924 113 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 RNU6-1035P-201ENST00000384477 107 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 MIR490-201ENST00000384865 128 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 AL031121.1-201ENST00000406553 254 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 RNA5SP229-201ENST00000410809 99 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.69□□□□□ -1.82
ERCC4Q92889 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.69□□□□□ -1.82
ERCC4Q92889 AC034236.1-201ENST00000469891 373 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 RPL30P10-201ENST00000488148 337 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.69□□□□□ -1.82
ERCC4Q92889 SNORA43.2-201ENST00000516652 128 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 SNORA31.26-201ENST00000517250 137 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 AC245166.1-201ENST00000521012 253 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 AP004607.1-201ENST00000524456 203 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 AL355297.3-201ENST00000604082 446 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 uc_338.1-201ENST00000612113 180 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 AC073476.4-201ENST00000628409 72 ntBASIC3.69□□□□□ -1.82
ERCC4Q92889 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.69□□□□□ -1.82
ERCC4Q92889 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.69□□□□□ -1.82
ERCC4Q92889 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ERCC4Q92889 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
ERCC4Q92889 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.68□□□□□ -1.82
ERCC4Q92889 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.68□□□□□ -1.82
ERCC4Q92889 Y_RNA.176-201ENST00000363815 109 ntBASIC3.68□□□□□ -1.82
ERCC4Q92889 SET-203ENST00000372688 801 ntTSL 2 BASIC3.68□□□□□ -1.82
ERCC4Q92889 RNU6-658P-201ENST00000384606 106 ntBASIC3.68□□□□□ -1.82
ERCC4Q92889 Y_RNA.574-201ENST00000384766 95 ntBASIC3.68□□□□□ -1.82
ERCC4Q92889 MIR218-2-201ENST00000385006 110 ntBASIC3.68□□□□□ -1.82
ERCC4Q92889 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
ERCC4Q92889 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
ERCC4Q92889 HMGN2P30-201ENST00000423237 256 ntBASIC3.68□□□□□ -1.82
ERCC4Q92889 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.68□□□□□ -1.82
ERCC4Q92889 YME1L1P1-201ENST00000429435 297 ntBASIC3.68□□□□□ -1.82
ERCC4Q92889 MTND3P9-201ENST00000429526 346 ntBASIC3.68□□□□□ -1.82
ERCC4Q92889 CST9LP2-201ENST00000437612 320 ntBASIC3.68□□□□□ -1.82
ERCC4Q92889 AL731563.1-201ENST00000442202 214 ntBASIC3.68□□□□□ -1.82
ERCC4Q92889 AL590664.1-201ENST00000448065 339 ntBASIC3.68□□□□□ -1.82
ERCC4Q92889 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.68□□□□□ -1.82
ERCC4Q92889 AC110794.1-201ENST00000505816 425 ntBASIC3.68□□□□□ -1.82
ERCC4Q92889 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.68□□□□□ -1.82
ERCC4Q92889 AC004584.2-201ENST00000570407 410 ntBASIC3.68□□□□□ -1.82
ERCC4Q92889 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.68□□□□□ -1.82
ERCC4Q92889 MIR7851-201ENST00000610611 160 ntBASIC3.68□□□□□ -1.82
ERCC4Q92889 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.68□□□□□ -1.82
ERCC4Q92889 U4.1-201ENST00000620349 87 ntBASIC3.68□□□□□ -1.82
ERCC4Q92889 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ERCC4Q92889 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms