Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.15□□□□□ -1.74
TMEM40Q8WWA1 RNU6-884P-201ENST00000363889 107 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 RNA5SP205-201ENST00000364653 136 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 Y_RNA.275-201ENST00000364726 110 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 RNU6-818P-201ENST00000364837 108 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 RNU6-926P-201ENST00000384075 107 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 Y_RNA.580-201ENST00000391004 95 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 YPEL5P1-201ENST00000419731 367 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 SNORA71B-202ENST00000439232 272 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 AC069285.2-201ENST00000440210 275 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 RPL30P1-201ENST00000488676 339 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 RNA5SP208-201ENST00000516156 78 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 RNU6-919P-201ENST00000516731 104 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 Y_RNA.706-201ENST00000516933 99 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 MIR3944-201ENST00000581277 108 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 SNORA62.6-201ENST00000606322 83 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 AC012314.7-201ENST00000619693 93 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 MTND1P7-201ENST00000632801 297 ntBASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TMEM40Q8WWA1 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 AC009541.1-201ENST00000438279 2662 ntBASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 Y_RNA.569-201ENST00000384749 103 ntBASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 MIR7-3-201ENST00000384898 110 ntBASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 MIR518D-201ENST00000385014 87 ntBASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 MIR888-201ENST00000401186 77 ntBASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 AC010154.1-201ENST00000425857 269 ntBASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 AC106707.2-201ENST00000484182 374 ntBASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 RNU7-175P-201ENST00000515915 61 ntBASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 RNU6-426P-201ENST00000516464 97 ntBASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 AC104581.2-201ENST00000572227 430 ntBASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 AL391261.4-201ENST00000616012 481 ntBASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 AC135776.4-201ENST00000624300 1904 ntBASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.14□□□□□ -1.75
TMEM40Q8WWA1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 AC010733.2-201ENST00000589496 5702 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 RNU6-1298P-201ENST00000362456 101 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 Y_RNA.273-201ENST00000364703 102 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 Y_RNA.400-201ENST00000383963 111 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 SNORD78.2-201ENST00000391076 69 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 RNU6-257P-201ENST00000410238 98 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 RNA5SP146-201ENST00000410743 123 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 RNU6-1245P-201ENST00000411130 106 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 AC008267.6-201ENST00000441664 139 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 AP001025.1-201ENST00000486139 332 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 AC026726.1-201ENST00000512859 601 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 AC060766.3-201ENST00000591442 263 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 AC020895.1-201ENST00000595362 272 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 RPL23AP78-201ENST00000599928 470 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 AC241585.2-209ENST00000638217 143 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 AC011266.1-201ENST00000624119 3569 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 LINC01355-201ENST00000566551 5444 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 AL672296.1-201ENST00000427780 2158 ntBASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TMEM40Q8WWA1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
TMEM40Q8WWA1 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.12□□□□□ -1.75
TMEM40Q8WWA1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
TMEM40Q8WWA1 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TMEM40Q8WWA1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TMEM40Q8WWA1 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TMEM40Q8WWA1 AC087190.4-201ENST00000574616 8334 ntBASIC4.12□□□□□ -1.75
TMEM40Q8WWA1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms