Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC12Q8WUD4 RRN3P3-201ENST00000549207 578 ntBASIC1.21□□□□□ -2.22
CCDC12Q8WUD4 AC019288.1-201ENST00000557918 224 ntBASIC1.21□□□□□ -2.22
CCDC12Q8WUD4 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.21□□□□□ -2.22
CCDC12Q8WUD4 AL159153.1-201ENST00000619688 317 ntBASIC1.21□□□□□ -2.22
CCDC12Q8WUD4 FRG1KP-201ENST00000623592 341 ntBASIC1.21□□□□□ -2.22
CCDC12Q8WUD4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC12Q8WUD4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CCDC12Q8WUD4 MIR513A1-201ENST00000385138 129 ntBASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 TOMM22P2-201ENST00000430735 237 ntBASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 AL135790.2-201ENST00000437701 267 ntBASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 RPL30P12-201ENST00000474666 353 ntBASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 HMGN1P13-201ENST00000505795 138 ntBASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 RAB11AP2-201ENST00000545905 639 ntBASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 AC012414.6-201ENST00000568241 401 ntBASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 AL138889.2-201ENST00000603883 242 ntBASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 AL590240.4-201ENST00000616908 390 ntBASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 AC022513.1-201ENST00000624512 117 ntBASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC12Q8WUD4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 RNU5E-10P-201ENST00000363506 118 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 RNU6-1000P-201ENST00000391066 106 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 MTCYBP5-201ENST00000423752 1135 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 RPS27P16-201ENST00000425758 201 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 AL669831.1-202ENST00000428504 417 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 RPL23AP30-201ENST00000432419 501 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 UBE2V1P8-201ENST00000437166 265 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 AC027119.1-201ENST00000440877 241 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 JTBP1-201ENST00000441314 247 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 MTND2P4-201ENST00000445034 1004 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 GDI2P2-201ENST00000445131 608 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 COX6CP14-201ENST00000469580 174 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 RPL26P26-201ENST00000480251 434 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 HMGN1P7-201ENST00000491722 313 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 Y_RNA.687-201ENST00000516558 91 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 BNIP3P6-201ENST00000549284 499 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 AL592221.1-201ENST00000605266 382 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 AC080078.3-201ENST00000605407 463 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 SNORD114-21-201ENST00000606412 72 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 AL138955.1-201ENST00000622881 1040 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 AC007792.1-201ENST00000623023 402 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 AL138960.2-201ENST00000625145 535 ntBASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC12Q8WUD4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 ICE2P2-201ENST00000483823 2787 ntBASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 RNU1-22P-201ENST00000363334 158 ntBASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 AC244505.5-201ENST00000443639 207 ntBASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 USP9YP17-201ENST00000444617 696 ntBASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 SNORA43.2-201ENST00000516652 128 ntBASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 AC107934.1-201ENST00000522215 217 ntBASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 MIR4307-201ENST00000582802 84 ntBASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 AL391001.1-201ENST00000602747 715 ntBASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 AC022022.2-201ENST00000602989 360 ntBASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
CCDC12Q8WUD4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC12Q8WUD4 SNORD33-201ENST00000362761 85 ntBASIC1.17□□□□□ -2.22
CCDC12Q8WUD4 RNY4P16-201ENST00000364768 94 ntBASIC1.17□□□□□ -2.22
CCDC12Q8WUD4 RNU6-384P-201ENST00000364900 104 ntBASIC1.17□□□□□ -2.22
CCDC12Q8WUD4 RNU6-296P-201ENST00000384608 107 ntBASIC1.17□□□□□ -2.22
CCDC12Q8WUD4 RPS20P2-201ENST00000402520 389 ntBASIC1.17□□□□□ -2.22
CCDC12Q8WUD4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC12Q8WUD4 MTND3P1-201ENST00000441336 220 ntBASIC1.17□□□□□ -2.22
CCDC12Q8WUD4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC12Q8WUD4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC12Q8WUD4 OR2A41P-201ENST00000473586 105 ntBASIC1.17□□□□□ -2.22
CCDC12Q8WUD4 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC12Q8WUD4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms