Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AC072046.2-201ENST00000618366 268 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AC048344.4-201ENST00000619744 527 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 MTND5P42-201ENST00000637720 498 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 ZNF209P-201ENST00000593450 2304 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 Y_RNA.318-201ENST00000365131 97 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 RNU6-234P-201ENST00000365229 104 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 RNU6-395P-201ENST00000365662 106 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC074117.2-201ENST00000417130 397 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 ISCA1P1-201ENST00000426679 387 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AL627311.1-201ENST00000431514 115 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC016691.1-201ENST00000441321 413 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 RNU6-956P-201ENST00000458868 103 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC098591.2-201ENST00000510152 315 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 MIR514B-201ENST00000516774 80 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 GLYCAM1-201ENST00000546596 285 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 HMGB1P14-201ENST00000557424 591 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 MIR3609-201ENST00000582661 80 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AL355877.2-201ENST00000603670 358 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 DUSP12P1-201ENST00000612874 516 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC093783.1-201ENST00000612976 329 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AL158209.2-201ENST00000619266 216 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 UCA1.1-201ENST00000620952 75 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 SNORD3E-201ENST00000362899 217 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 SNORA62.1-201ENST00000364287 154 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 RNU6-297P-201ENST00000384636 107 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 MIR518D-201ENST00000385014 87 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 BPY2DP-201ENST00000422208 265 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 BRK1P2-201ENST00000442875 223 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 HMGB3P3-201ENST00000510526 400 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 RNU6-143P-201ENST00000516942 93 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 SCARNA3-201ENST00000517097 143 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC090821.2-201ENST00000523552 176 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 OR5B19P-201ENST00000531766 928 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC004223.2-201ENST00000590309 544 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC103591.3-201ENST00000608684 209 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC124864.2-201ENST00000624736 186 ntBASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.5□□□□□ -2.17
SHROOM3Q8TF72 Y_RNA.517-201ENST00000384551 106 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 Y_RNA.576-201ENST00000384781 102 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 AL355497.1-201ENST00000406262 551 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 RNU2-36P-201ENST00000410361 191 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 RNU6-174P-201ENST00000410406 106 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 NDUFS5P4-201ENST00000412983 318 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 C1DP2-201ENST00000418167 426 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 MED13P1-201ENST00000428342 171 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 MTATP6P16-201ENST00000434543 526 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 AC098831.1-201ENST00000440661 216 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 SNRPGP13-201ENST00000442212 177 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 AC009474.2-201ENST00000451383 136 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 AC139453.3-201ENST00000493276 369 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 AC091133.4-201ENST00000511142 308 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 AC007151.1-201ENST00000572774 483 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 AC007363.1-201ENST00000604736 620 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 AC008536.2-201ENST00000607284 349 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 AC008669.1-201ENST00000565823 2178 ntBASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
SHROOM3Q8TF72 RNU6-1097P-201ENST00000363586 107 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 RNU4-91P-201ENST00000364778 135 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 SNORD116-20-201ENST00000384529 92 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 MIR454-201ENST00000390180 115 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AL030996.1-201ENST00000411430 235 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AC023141.4-201ENST00000412031 328 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms