Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.24□□□□□ -2.21
LMX1AQ8TE12 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.24□□□□□ -2.21
LMX1AQ8TE12 RNU5F-6P-201ENST00000362979 116 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 RNU6-501P-201ENST00000364072 100 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
LMX1AQ8TE12 MIR558-201ENST00000384920 94 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 RNA5SP390-201ENST00000410191 113 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 MTCYBP5-201ENST00000423752 1135 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 UBE2V1P4-201ENST00000425374 344 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 USP9YP18-201ENST00000425912 695 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC137499.1-201ENST00000427602 88 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.23□□□□□ -2.21
LMX1AQ8TE12 VN1R108P-201ENST00000431580 830 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.23□□□□□ -2.21
LMX1AQ8TE12 CALM1P1-201ENST00000442082 433 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 MTND5P2-201ENST00000442927 1142 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.23□□□□□ -2.21
LMX1AQ8TE12 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AL121594.1-201ENST00000475906 575 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 HMGB1P30-201ENST00000492455 606 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC010587.1-201ENST00000505809 469 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.23□□□□□ -2.21
LMX1AQ8TE12 RNU6-586P-201ENST00000517265 104 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AP004607.1-201ENST00000524456 203 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 MTND4LP18-201ENST00000526864 291 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.23□□□□□ -2.21
LMX1AQ8TE12 CYCSP27-201ENST00000527643 293 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC018630.3-201ENST00000542637 96 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC093249.1-201ENST00000567049 203 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC002400.1-201ENST00000569310 726 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 BNIP3P30-201ENST00000601184 574 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 CLIC4P2-201ENST00000601934 717 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC073410.2-201ENST00000603240 332 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC073413.2-201ENST00000604332 360 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC080078.3-201ENST00000605407 463 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC105129.3-201ENST00000605455 485 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC093788.1-201ENST00000609356 927 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC012409.4-201ENST00000612923 249 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 MIR7844-201ENST00000616161 122 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AL159153.1-201ENST00000619688 317 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC099842.1-201ENST00000619919 596 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC009878.1-201ENST00000621819 340 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 RMST_7.1-201ENST00000621935 268 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC092192.1-201ENST00000633154 1018 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
LMX1AQ8TE12 AC099654.13-201ENST00000639774 207 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.23□□□□□ -2.21
LMX1AQ8TE12 MIR126-201ENST00000362291 85 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 Y_RNA.40-201ENST00000362645 93 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 RNU6-1214P-201ENST00000363650 109 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 RNU6-611P-201ENST00000384276 104 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 RNU6-39P-201ENST00000384344 107 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 MIR578-201ENST00000384828 96 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 MIR758-201ENST00000390227 88 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
LMX1AQ8TE12 CBX3P9-201ENST00000402326 552 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 RNU2-23P-201ENST00000410545 195 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 AC074117.2-201ENST00000417130 397 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.22□□□□□ -2.21
LMX1AQ8TE12 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.22□□□□□ -2.21
LMX1AQ8TE12 AL360271.2-201ENST00000447710 161 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 AL590365.1-201ENST00000450788 243 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 FO393415.2-201ENST00000480085 343 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.22□□□□□ -2.21
LMX1AQ8TE12 ATP5EP1-201ENST00000510257 156 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 AF131216.2-201ENST00000512316 564 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.22□□□□□ -2.21
LMX1AQ8TE12 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.22□□□□□ -2.21
LMX1AQ8TE12 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.22□□□□□ -2.21
LMX1AQ8TE12 AP003461.1-201ENST00000528866 78 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.22□□□□□ -2.21
LMX1AQ8TE12 MTCYBP33-201ENST00000575007 1130 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 AL078603.1-201ENST00000603824 313 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 AL359999.1-201ENST00000604513 294 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 AL139286.2-201ENST00000606838 396 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 AL136370.1-201ENST00000608166 691 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.22□□□□□ -2.21
LMX1AQ8TE12 U1.36-201ENST00000620684 176 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.22□□□□□ -2.21
LMX1AQ8TE12 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.22□□□□□ -2.21
LMX1AQ8TE12 AC007671.2-201ENST00000637344 619 ntBASIC1.22□□□□□ -2.21
LMX1AQ8TE12 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
LMX1AQ8TE12 Y_RNA.22-201ENST00000362492 102 ntBASIC1.21□□□□□ -2.22
LMX1AQ8TE12 RNU1-62P-201ENST00000362599 164 ntBASIC1.21□□□□□ -2.22
LMX1AQ8TE12 RNU1-22P-201ENST00000363334 158 ntBASIC1.21□□□□□ -2.22
LMX1AQ8TE12 RNU4-91P-201ENST00000364778 135 ntBASIC1.21□□□□□ -2.22
LMX1AQ8TE12 RNU6-1274P-201ENST00000384557 107 ntBASIC1.21□□□□□ -2.22
LMX1AQ8TE12 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
LMX1AQ8TE12 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
LMX1AQ8TE12 RPL21P1-201ENST00000399532 476 ntBASIC1.21□□□□□ -2.22
LMX1AQ8TE12 MTCYBP36-201ENST00000404146 440 ntBASIC1.21□□□□□ -2.22
LMX1AQ8TE12 OR9R1P-201ENST00000412200 877 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms