Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 RNU6-78P-201ENST00000362897 107 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 SNORA72.1-201ENST00000363485 129 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 RNU6-1280P-201ENST00000365211 107 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 MIR181B1-201ENST00000385240 110 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 RNU6-750P-201ENST00000390946 107 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 RNA5SP210-201ENST00000391034 120 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 MIR450B-201ENST00000401182 78 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 RN7SKP223-201ENST00000410582 62 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AC007064.1-201ENST00000412238 351 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 SNORD56-201ENST00000413522 71 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.93□□□□□ -2.1
LINC01006Q8NI28 TOMM20P4-201ENST00000427861 435 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AL356320.1-201ENST00000429616 163 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 NDUFA5P4-201ENST00000436704 385 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AL353572.1-201ENST00000442490 417 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.93□□□□□ -2.1
LINC01006Q8NI28 Z96811.1-201ENST00000445880 108 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AL031274.1-201ENST00000450334 232 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.93□□□□□ -2.1
LINC01006Q8NI28 PMCHL2-203ENST00000457791 237 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 RNU7-138P-201ENST00000459479 64 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AC103975.1-201ENST00000482506 483 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 MRPL42P6-201ENST00000486397 371 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 HMGN1P12-201ENST00000499125 195 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AC008628.2-201ENST00000502605 298 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01006Q8NI28 RNU6-507P-201ENST00000516045 100 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 RNA5SP76-201ENST00000516277 87 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 RNU6-56P-201ENST00000516986 93 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 ACA59.2-201ENST00000517061 156 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AC104576.1-201ENST00000524225 88 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AP004607.1-201ENST00000524456 203 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AC021269.2-201ENST00000532318 330 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AL121579.1-201ENST00000555129 305 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01006Q8NI28 MIR4648-201ENST00000580107 72 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 MIR4742-201ENST00000581069 85 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AC011712.1-201ENST00000588959 234 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AC091152.3-201ENST00000604227 325 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AL670379.10-201ENST00000604330 253 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AL670379.9-201ENST00000605428 253 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 RMST_7.1-201ENST00000621935 268 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 AL133216.2-202ENST00000634512 349 ntBASIC1.93□□□□□ -2.1
LINC01006Q8NI28 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01006Q8NI28 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
LINC01006Q8NI28 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
LINC01006Q8NI28 Y_RNA.72-201ENST00000362894 103 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 SNORD113-7-201ENST00000363762 77 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 RNA5SP456-201ENST00000364002 114 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LINC01006Q8NI28 SNORD88.1-201ENST00000408684 91 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AL513477.1-202ENST00000417061 214 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 PDCL2P1-201ENST00000419302 352 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.92□□□□□ -2.1
LINC01006Q8NI28 DPH3P2-201ENST00000422618 250 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AL590632.1-201ENST00000424289 371 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AC009296.1-201ENST00000443146 155 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 RPL7P12-201ENST00000446719 750 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.92□□□□□ -2.1
LINC01006Q8NI28 RPL39P5-202ENST00000512505 151 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 RNU6-864P-201ENST00000516256 108 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 SNORA43.2-201ENST00000516652 128 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 RNU6-256P-201ENST00000516747 97 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 RNU6-1088P-201ENST00000516850 104 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 SNORA31.26-201ENST00000517250 137 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AC069113.1-201ENST00000517763 267 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.92□□□□□ -2.1
LINC01006Q8NI28 CKS1BP7-201ENST00000522230 235 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 IGKV3-31-201ENST00000523109 329 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC01006Q8NI28 GLYCAM1-201ENST00000546596 285 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AC026464.5-201ENST00000562497 722 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC01006Q8NI28 MIR3672-201ENST00000584290 82 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 OR1M4P-201ENST00000589199 287 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 ELOCP5-201ENST00000604924 333 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AL121917.1-203ENST00000605534 577 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AC064836.2-201ENST00000609491 462 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AC107871.2-201ENST00000612894 502 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AC093913.1-201ENST00000614178 329 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AC097372.5-201ENST00000623665 376 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 SCARNA4-202ENST00000625402 129 ntBASIC1.92□□□□□ -2.1
LINC01006Q8NI28 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LINC01006Q8NI28 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LINC01006Q8NI28 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.92□□□□□ -2.1
LINC01006Q8NI28 AC026241.1-201ENST00000517873 2142 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AL355596.1-201ENST00000565399 3996 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 OR56A5-201ENST00000340110 738 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 RNU6-858P-201ENST00000362436 107 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 RNU6-428P-201ENST00000362942 107 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms