Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.61□□□□□ -1.67
NEDD1Q8NHV4 CYCSP30-201ENST00000546447 172 ntBASIC4.61□□□□□ -1.67
NEDD1Q8NHV4 AC074050.1-201ENST00000563247 211 ntBASIC4.61□□□□□ -1.67
NEDD1Q8NHV4 ZNF192P1-203ENST00000565888 810 ntBASIC4.61□□□□□ -1.67
NEDD1Q8NHV4 MIR5695-201ENST00000579717 85 ntBASIC4.61□□□□□ -1.67
NEDD1Q8NHV4 U7.2-201ENST00000607576 63 ntBASIC4.61□□□□□ -1.67
NEDD1Q8NHV4 AC069294.1-201ENST00000608397 350 ntBASIC4.61□□□□□ -1.67
NEDD1Q8NHV4 AC068831.7-201ENST00000616954 363 ntBASIC4.61□□□□□ -1.67
NEDD1Q8NHV4 MIR6715B-201ENST00000637172 77 ntBASIC4.61□□□□□ -1.67
NEDD1Q8NHV4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.61□□□□□ -1.67
NEDD1Q8NHV4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEDD1Q8NHV4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEDD1Q8NHV4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
NEDD1Q8NHV4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 Y_RNA.101-201ENST00000363154 102 ntBASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 Y_RNA.337-201ENST00000365312 102 ntBASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 U1.1-201ENST00000384101 164 ntBASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 SNORA36C-201ENST00000384289 132 ntBASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 MIR30B-201ENST00000384850 88 ntBASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 MIR487A-201ENST00000385009 80 ntBASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 BTF3L4P2-201ENST00000392798 346 ntBASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 RNU6-1199P-201ENST00000411249 104 ntBASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 AL160275.2-201ENST00000412010 394 ntBASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 HMGB1P37-201ENST00000439613 609 ntBASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 U8.19-201ENST00000459095 133 ntBASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 RN7SL542P-201ENST00000467147 294 ntBASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 RNU6-377P-201ENST00000515965 102 ntBASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 AP001328.1-201ENST00000528550 176 ntBASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 U4.7-201ENST00000638126 106 ntBASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
NEDD1Q8NHV4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 Y_RNA.116-201ENST00000363292 103 ntBASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 Y_RNA.294-201ENST00000364916 102 ntBASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 RNU6-1286P-201ENST00000383871 107 ntBASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 U8.10-201ENST00000384260 133 ntBASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 MIR10A-201ENST00000385043 110 ntBASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 RNA5SP56-201ENST00000410277 118 ntBASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 RNY4P29-201ENST00000410801 97 ntBASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 AC087588.1-201ENST00000462203 316 ntBASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 RN7SKP164-201ENST00000516138 266 ntBASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 AC021269.2-201ENST00000532318 330 ntBASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 DEFB117-201ENST00000602356 141 ntBASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 AP002826.1-201ENST00000608835 315 ntBASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NEDD1Q8NHV4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
NEDD1Q8NHV4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.59□□□□□ -1.68
NEDD1Q8NHV4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NEDD1Q8NHV4 AC009541.1-201ENST00000438279 2662 ntBASIC4.59□□□□□ -1.68
NEDD1Q8NHV4 AF127577.6-201ENST00000623352 2191 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 SNORA25.7-201ENST00000364375 127 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 Y_RNA.251-201ENST00000364551 99 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 RNA5SP97-201ENST00000365006 84 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 MT-TC-201ENST00000387405 66 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 SNORA12.1-201ENST00000390873 148 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 RNU6-1275P-201ENST00000391087 107 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 MIR888-201ENST00000401186 77 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 SNORA3.3-201ENST00000408712 125 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 BX276092.4-201ENST00000452056 248 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 RPL31P61-201ENST00000496160 376 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 SCARNA14-201ENST00000516903 136 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 RNU6-143P-201ENST00000516942 93 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 AC109810.1-201ENST00000534066 224 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 NACAP3-201ENST00000552100 481 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 MIR1254-2-201ENST00000579553 63 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 AL161798.1-201ENST00000604630 131 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 AC034229.5-201ENST00000624258 185 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 AL136964.1-201ENST00000622038 2990 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 ZNF702P-202ENST00000434269 1966 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 AL356489.2-201ENST00000566968 3528 ntBASIC4.58□□□□□ -1.68
NEDD1Q8NHV4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms