Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC006518.2-201ENST00000542513 940 ntBASIC0.14□□□□□ -2.39
SPTSSBQ8NFR3 BNIP3P6-201ENST00000549284 499 ntBASIC0.14□□□□□ -2.39
SPTSSBQ8NFR3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.14□□□□□ -2.39
SPTSSBQ8NFR3 VN1R80P-201ENST00000597126 338 ntBASIC0.14□□□□□ -2.39
SPTSSBQ8NFR3 BNIP3P8-201ENST00000597863 560 ntBASIC0.14□□□□□ -2.39
SPTSSBQ8NFR3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.14□□□□□ -2.39
SPTSSBQ8NFR3 BNIP3P9-201ENST00000603714 553 ntBASIC0.14□□□□□ -2.39
SPTSSBQ8NFR3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.14□□□□□ -2.39
SPTSSBQ8NFR3 AC018630.2-201ENST00000534866 2403 ntBASIC0.14□□□□□ -2.39
SPTSSBQ8NFR3 AC107982.1-201ENST00000507171 1300 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 RNU6-862P-201ENST00000362804 105 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 RNU6-481P-201ENST00000384194 107 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 Y_RNA.534-201ENST00000384599 112 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 MIR634-201ENST00000385208 97 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 RNU6-817P-201ENST00000391083 104 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 MIR1261-201ENST00000408659 82 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 ARL5AP1-201ENST00000418991 388 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 AC013262.1-201ENST00000426710 252 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 USP9YP14-201ENST00000430663 563 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 AL591704.1-201ENST00000432574 275 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 AL513124.1-201ENST00000450410 614 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 AC012308.1-201ENST00000451232 178 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 ATP5J2P3-201ENST00000451550 258 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 MTND1P3-201ENST00000484956 952 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 AC108740.1-201ENST00000498629 225 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 AC098799.1-201ENST00000504752 800 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 AC091435.1-201ENST00000505442 584 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 ARL2BPP4-201ENST00000506854 471 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 RNU6-143P-201ENST00000516942 93 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 AC090330.1-201ENST00000588646 764 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 AL158827.2-201ENST00000602494 330 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 AC080078.3-201ENST00000605407 463 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 AC005858.4-201ENST00000623191 700 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 AL691447.3-201ENST00000635020 330 ntBASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
SPTSSBQ8NFR3 AC068700.1-201ENST00000565862 3754 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 MIR378A-201ENST00000362177 66 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 MIR301A-201ENST00000385261 86 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 ELOCP9-201ENST00000418624 239 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 AC011233.1-201ENST00000422812 283 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 AC092423.1-201ENST00000430165 186 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 CALM1P1-201ENST00000442082 433 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 GXYLT1P1-201ENST00000446657 490 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 snoU13.15-201ENST00000459407 104 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 AC105758.1-201ENST00000506038 399 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 RNU4-57P-201ENST00000515980 135 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 RNU6-229P-201ENST00000516614 102 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 AC044913.1-201ENST00000557200 430 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 AC092325.1-201ENST00000566449 554 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 AC109446.2-201ENST00000567872 497 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 MIR4709-201ENST00000577272 72 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 KC877982.1-201ENST00000602313 470 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 AC092106.3-201ENST00000611308 722 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 AC007792.1-201ENST00000623023 402 ntBASIC0.12□□□□□ -2.39
SPTSSBQ8NFR3 AC090625.1-201ENST00000357130 210 ntBASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 Y_RNA.327-201ENST00000365201 102 ntBASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 SNORA80D-201ENST00000384488 135 ntBASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 SNORD65.1-201ENST00000390889 71 ntBASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 RNA5SP111-201ENST00000411386 101 ntBASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 HMGN1P14-201ENST00000412459 517 ntBASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 COX6CP10-201ENST00000416832 224 ntBASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 RPS3AP37-201ENST00000419176 745 ntBASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 AC092628.1-201ENST00000436250 252 ntBASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 MTND1P31-201ENST00000449206 961 ntBASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 SLC2A13P1-201ENST00000531560 322 ntBASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 MIR4742-201ENST00000581069 85 ntBASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 MIR4293-201ENST00000584305 78 ntBASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 AC100814.1-201ENST00000606963 623 ntBASIC0.11□□□□□ -2.39
SPTSSBQ8NFR3 RNU6-1284P-201ENST00000363701 100 ntBASIC0.1□□□□□ -2.39
SPTSSBQ8NFR3 SNORA4.2-201ENST00000365313 147 ntBASIC0.1□□□□□ -2.39
SPTSSBQ8NFR3 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
SPTSSBQ8NFR3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.1□□□□□ -2.39
SPTSSBQ8NFR3 MTCYBP5-201ENST00000423752 1135 ntBASIC0.1□□□□□ -2.39
SPTSSBQ8NFR3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.1□□□□□ -2.39
SPTSSBQ8NFR3 RPL23AP95-201ENST00000426806 265 ntBASIC0.1□□□□□ -2.39
SPTSSBQ8NFR3 MTND5P14-201ENST00000441481 1267 ntBASIC0.1□□□□□ -2.39
SPTSSBQ8NFR3 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.1□□□□□ -2.39
SPTSSBQ8NFR3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.1□□□□□ -2.39
SPTSSBQ8NFR3 AC104563.1-201ENST00000476147 376 ntBASIC0.1□□□□□ -2.39
SPTSSBQ8NFR3 SNORA68.3-201ENST00000515906 83 ntBASIC0.1□□□□□ -2.39
SPTSSBQ8NFR3 RNU6-583P-201ENST00000516012 92 ntBASIC0.1□□□□□ -2.39
SPTSSBQ8NFR3 RNU6-1315P-201ENST00000517187 99 ntBASIC0.1□□□□□ -2.39
SPTSSBQ8NFR3 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms