Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.19□□□□□ -2.22
ZIC4Q8N9L1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.19□□□□□ -2.22
ZIC4Q8N9L1 TRAV32-201ENST00000553993 340 ntBASIC1.19□□□□□ -2.22
ZIC4Q8N9L1 MIR4421-201ENST00000578133 69 ntBASIC1.19□□□□□ -2.22
ZIC4Q8N9L1 MIR5692A1-201ENST00000580523 69 ntBASIC1.19□□□□□ -2.22
ZIC4Q8N9L1 AP000811.1-201ENST00000603803 651 ntBASIC1.19□□□□□ -2.22
ZIC4Q8N9L1 AC063943.3-201ENST00000615562 356 ntBASIC1.19□□□□□ -2.22
ZIC4Q8N9L1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.19□□□□□ -2.22
ZIC4Q8N9L1 MIR1248-201ENST00000629190 106 ntBASIC1.19□□□□□ -2.22
ZIC4Q8N9L1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 MIR378A-201ENST00000362177 66 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 RNU6-338P-201ENST00000383888 105 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 RNU6-203P-201ENST00000384038 104 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 MIR758-201ENST00000390227 88 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 AL357139.1-201ENST00000407792 426 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 RNU2-39P-201ENST00000410604 198 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 RNA5SP100-201ENST00000410903 110 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 RNA5SP59-201ENST00000410922 110 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 RNA5SP111-201ENST00000411386 101 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 MTND4P20-201ENST00000424125 869 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 MTCO3P46-201ENST00000425787 232 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 RPS24P1-201ENST00000438550 371 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 RPL39P29-201ENST00000447779 157 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 AC010587.1-201ENST00000505809 469 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 RNU1-92P-201ENST00000517017 135 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 MIR5697-201ENST00000578045 78 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 AC123912.5-201ENST00000605470 343 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 RNU6-87P-201ENST00000607561 108 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 AC008993.2-201ENST00000631744 806 ntBASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
ZIC4Q8N9L1 AL391994.1-201ENST00000254724 282 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 RNA5SP432-201ENST00000362480 116 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 SNORA7.1-201ENST00000363750 139 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 SNORA62.1-201ENST00000364287 154 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 RNU5E-7P-201ENST00000365290 117 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 RNU6-641P-201ENST00000384006 107 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 RNU6-1176P-201ENST00000390955 107 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 AC114491.1-201ENST00000416095 246 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 MED13P1-201ENST00000428342 171 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 AL591043.1-201ENST00000432461 424 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 AL354941.1-201ENST00000438600 464 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 CR769776.1-201ENST00000441254 787 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 AL360271.2-201ENST00000447710 161 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 AL009048.1-201ENST00000450437 298 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 RNU1-123P-201ENST00000458950 160 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 RNU6-333P-201ENST00000459117 107 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 AC004223.1-201ENST00000479840 271 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 RNVU1-2-201ENST00000516326 135 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 AC115990.1-201ENST00000526957 301 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 AL160236.1-201ENST00000556317 195 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 PCMTD1P2-201ENST00000565017 355 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 AC068338.1-201ENST00000565567 176 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 AC091489.2-201ENST00000566263 604 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 MIR4999-201ENST00000585029 91 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 MTCO2P2-201ENST00000591258 225 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 MIR8074-201ENST00000615081 81 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 RMST_7.1-201ENST00000621935 268 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 AL157786.1-207ENST00000627771 695 ntBASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
ZIC4Q8N9L1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 RNU6-78P-201ENST00000362897 107 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 RNA5SP493-201ENST00000364115 91 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 RNU6-39P-201ENST00000384344 107 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 SNORA24.1-201ENST00000384401 135 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 AL031779.1-201ENST00000415663 330 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 C1DP2-201ENST00000418167 426 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 ELOCP4-201ENST00000420090 333 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 MTCO2P23-201ENST00000425216 680 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 AL603825.1-201ENST00000438481 80 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 AC009474.2-201ENST00000451383 136 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 AL122001.1-201ENST00000457027 370 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 MTCYBP35-201ENST00000503630 1137 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 MTCO3P9-201ENST00000506989 781 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 AC009646.1-201ENST00000510455 318 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms