Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.38□□□□□ -2.03
RTL3Q8N8U3 AC104058.1-201ENST00000448028 297 ntBASIC2.38□□□□□ -2.03
RTL3Q8N8U3 AC117503.1-201ENST00000472241 394 ntBASIC2.38□□□□□ -2.03
RTL3Q8N8U3 MED28P2-201ENST00000475771 317 ntBASIC2.38□□□□□ -2.03
RTL3Q8N8U3 AC092989.1-201ENST00000481235 277 ntBASIC2.38□□□□□ -2.03
RTL3Q8N8U3 AC068781.1-201ENST00000488231 618 ntBASIC2.38□□□□□ -2.03
RTL3Q8N8U3 AC022493.1-201ENST00000492984 337 ntBASIC2.38□□□□□ -2.03
RTL3Q8N8U3 RPL38P4-201ENST00000502376 214 ntBASIC2.38□□□□□ -2.03
RTL3Q8N8U3 AC112206.3-201ENST00000514578 389 ntBASIC2.38□□□□□ -2.03
RTL3Q8N8U3 RNA5SP401-201ENST00000515920 127 ntBASIC2.38□□□□□ -2.03
RTL3Q8N8U3 AP004607.1-201ENST00000524456 203 ntBASIC2.38□□□□□ -2.03
RTL3Q8N8U3 MTCO3P23-201ENST00000561363 289 ntBASIC2.38□□□□□ -2.03
RTL3Q8N8U3 AP000907.4-201ENST00000604143 237 ntBASIC2.38□□□□□ -2.03
RTL3Q8N8U3 RMST_3.1-201ENST00000611651 109 ntBASIC2.38□□□□□ -2.03
RTL3Q8N8U3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.38□□□□□ -2.03
RTL3Q8N8U3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.38□□□□□ -2.03
RTL3Q8N8U3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.38□□□□□ -2.03
RTL3Q8N8U3 MIR203B-201ENST00000636080 86 ntBASIC2.38□□□□□ -2.03
RTL3Q8N8U3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.37□□□□□ -2.03
RTL3Q8N8U3 RNU6-1287P-201ENST00000362914 107 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 Y_RNA.295-201ENST00000364918 102 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 RNU4-20P-201ENST00000365601 151 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RTL3Q8N8U3 RNU6-1127P-201ENST00000384580 107 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 RNU6-1060P-201ENST00000384664 107 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 RNU6-1179P-201ENST00000384667 107 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 FGF7P8-201ENST00000402994 292 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 RNU6-1068P-201ENST00000410958 103 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 RNA5SP270-201ENST00000411361 118 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 MTND1P23-201ENST00000416931 372 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 TOMM20P4-201ENST00000427861 435 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 SRIP2-201ENST00000428470 166 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 AL669831.1-202ENST00000428504 417 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 AL139415.2-201ENST00000431968 163 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 AC018634.1-201ENST00000437554 401 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 GTF2IP13-201ENST00000438487 386 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 HIGD1AP2-201ENST00000446367 280 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 NDUFB1P2-201ENST00000449477 176 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 AC069439.1-201ENST00000494739 167 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.37□□□□□ -2.03
RTL3Q8N8U3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 RNA5SP281-201ENST00000516504 135 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 AL137161.1-201ENST00000532231 390 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.37□□□□□ -2.03
RTL3Q8N8U3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.37□□□□□ -2.03
RTL3Q8N8U3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.37□□□□□ -2.03
RTL3Q8N8U3 AL138889.2-201ENST00000603883 242 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RTL3Q8N8U3 DISC2.1-201ENST00000612827 205 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
RTL3Q8N8U3 AL161423.1-201ENST00000613700 262 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 AC009233.1-201ENST00000616477 371 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 AC024614.3-201ENST00000637860 256 ntBASIC2.37□□□□□ -2.03
RTL3Q8N8U3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
RTL3Q8N8U3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RTL3Q8N8U3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
RTL3Q8N8U3 SNORD3E-201ENST00000362899 217 ntBASIC2.36□□□□□ -2.03
RTL3Q8N8U3 RNU6-371P-201ENST00000364283 108 ntBASIC2.36□□□□□ -2.03
RTL3Q8N8U3 RNU6-38P-201ENST00000384085 107 ntBASIC2.36□□□□□ -2.03
RTL3Q8N8U3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RTL3Q8N8U3 RNA5SP118-201ENST00000410385 109 ntBASIC2.36□□□□□ -2.03
RTL3Q8N8U3 OR9R1P-201ENST00000412200 877 ntBASIC2.36□□□□□ -2.03
RTL3Q8N8U3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.36□□□□□ -2.03
RTL3Q8N8U3 AL161788.1-201ENST00000441805 169 ntBASIC2.36□□□□□ -2.03
RTL3Q8N8U3 RNU6-333P-201ENST00000459117 107 ntBASIC2.36□□□□□ -2.03
RTL3Q8N8U3 snoU109.2-201ENST00000459316 135 ntBASIC2.36□□□□□ -2.03
RTL3Q8N8U3 HMGB1P30-201ENST00000492455 606 ntBASIC2.36□□□□□ -2.03
RTL3Q8N8U3 AC091885.1-201ENST00000506658 268 ntBASIC2.36□□□□□ -2.03
RTL3Q8N8U3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RTL3Q8N8U3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.36□□□□□ -2.03
RTL3Q8N8U3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.36□□□□□ -2.03
RTL3Q8N8U3 MIR3126-201ENST00000577443 74 ntBASIC2.36□□□□□ -2.03
RTL3Q8N8U3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.36□□□□□ -2.03
RTL3Q8N8U3 AC008121.3-201ENST00000618726 433 ntBASIC2.36□□□□□ -2.03
RTL3Q8N8U3 AC010378.1-201ENST00000619270 362 ntBASIC2.36□□□□□ -2.03
RTL3Q8N8U3 MIR6766-201ENST00000622641 72 ntBASIC2.36□□□□□ -2.03
RTL3Q8N8U3 AP006437.1-201ENST00000641440 3685 ntBASIC2.36□□□□□ -2.03
RTL3Q8N8U3 RBBP8P1-201ENST00000449447 1844 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RTL3Q8N8U3 RNU6-877P-201ENST00000383868 107 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 Y_RNA.399-201ENST00000383955 105 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 RNU6-72P-201ENST00000384285 79 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 RNU4-53P-201ENST00000410828 140 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 AC009238.1-201ENST00000442165 424 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 AC009237.6-201ENST00000446969 424 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 AL360271.2-201ENST00000447710 161 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 NFU1P2-201ENST00000448700 469 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.35□□□□□ -2.03
RTL3Q8N8U3 AC006026.2-201ENST00000457376 180 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 SNRPFP3-201ENST00000457792 225 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.35□□□□□ -2.03
RTL3Q8N8U3 CCDC34P1-201ENST00000507441 517 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.35□□□□□ -2.03
RTL3Q8N8U3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.35□□□□□ -2.03
RTL3Q8N8U3 RNU6-358P-201ENST00000516564 75 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 AC118273.2-201ENST00000532092 465 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 RPS3AP23-202ENST00000574601 686 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
RTL3Q8N8U3 AL670379.4-201ENST00000605279 254 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms