Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.53□□□□□ -2
CPSF7Q8N684 RNU5F-8P-201ENST00000515941 111 ntBASIC2.53□□□□□ -2
CPSF7Q8N684 SCARNA17.1-201ENST00000516211 143 ntBASIC2.53□□□□□ -2
CPSF7Q8N684 SCARNA17.2-201ENST00000516334 143 ntBASIC2.53□□□□□ -2
CPSF7Q8N684 RNA5SP282-201ENST00000516355 108 ntBASIC2.53□□□□□ -2
CPSF7Q8N684 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.53□□□□□ -2
CPSF7Q8N684 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.53□□□□□ -2
CPSF7Q8N684 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.53□□□□□ -2
CPSF7Q8N684 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.53□□□□□ -2
CPSF7Q8N684 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.53□□□□□ -2
CPSF7Q8N684 AL137847.3-201ENST00000611521 109 ntBASIC2.53□□□□□ -2
CPSF7Q8N684 SCARNA17.4-201ENST00000614296 143 ntBASIC2.53□□□□□ -2
CPSF7Q8N684 AL136221.1-201ENST00000621449 509 ntBASIC2.53□□□□□ -2
CPSF7Q8N684 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.53□□□□□ -2
CPSF7Q8N684 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CPSF7Q8N684 AC138915.1-201ENST00000565427 1685 ntBASIC2.53□□□□□ -2
CPSF7Q8N684 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CPSF7Q8N684 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CPSF7Q8N684 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CPSF7Q8N684 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CPSF7Q8N684 RNU6-254P-201ENST00000363377 107 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 Y_RNA.160-201ENST00000363677 92 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 Y_RNA.414-201ENST00000384011 101 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 SNORA80E-201ENST00000384744 137 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 MT-TL1-201ENST00000386347 75 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 FGF7P8-201ENST00000402994 292 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 RNA5SP21-201ENST00000410917 96 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 RNU6-1148P-201ENST00000410992 104 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 AL513185.2-201ENST00000425543 193 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 AC004383.1-201ENST00000438135 289 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.52□□□□□ -2.01
CPSF7Q8N684 EEF1B2P7-201ENST00000451177 676 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 RPL23AP49-201ENST00000492925 468 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.52□□□□□ -2.01
CPSF7Q8N684 AC116353.2-201ENST00000505332 712 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 AC107222.1-201ENST00000510899 637 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 RNU6-377P-201ENST00000515965 102 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 AC109479.2-201ENST00000517842 174 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 GLYCAM1-201ENST00000546596 285 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 CR383656.8-201ENST00000549046 145 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 AC010620.2-201ENST00000600135 313 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.52□□□□□ -2.01
CPSF7Q8N684 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CPSF7Q8N684 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.52□□□□□ -2.01
CPSF7Q8N684 MIR3529-201ENST00000637713 78 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 Z82195.2-201ENST00000612348 18351 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 ZNF519P1-201ENST00000449011 1626 ntBASIC2.52□□□□□ -2.01
CPSF7Q8N684 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CPSF7Q8N684 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CPSF7Q8N684 RNU6-859P-201ENST00000362728 107 ntBASIC2.51□□□□□ -2.01
CPSF7Q8N684 RNU6-527P-201ENST00000363425 104 ntBASIC2.51□□□□□ -2.01
CPSF7Q8N684 U8.8-201ENST00000365399 135 ntBASIC2.51□□□□□ -2.01
CPSF7Q8N684 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CPSF7Q8N684 SNORD73A-201ENST00000386062 65 ntBASIC2.51□□□□□ -2.01
CPSF7Q8N684 RNU2-25P-201ENST00000411041 191 ntBASIC2.51□□□□□ -2.01
CPSF7Q8N684 RNA5SP508-201ENST00000411327 119 ntBASIC2.51□□□□□ -2.01
CPSF7Q8N684 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CPSF7Q8N684 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CPSF7Q8N684 RNU7-66P-201ENST00000459469 62 ntBASIC2.51□□□□□ -2.01
CPSF7Q8N684 AP001324.2-201ENST00000461163 319 ntBASIC2.51□□□□□ -2.01
CPSF7Q8N684 TRBVA-201ENST00000498804 316 ntBASIC2.51□□□□□ -2.01
CPSF7Q8N684 AC008628.2-201ENST00000502605 298 ntBASIC2.51□□□□□ -2.01
CPSF7Q8N684 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.51□□□□□ -2.01
CPSF7Q8N684 RNU6-1332P-201ENST00000516666 104 ntBASIC2.51□□□□□ -2.01
CPSF7Q8N684 RPPH1-2P-201ENST00000516688 293 ntBASIC2.51□□□□□ -2.01
CPSF7Q8N684 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.51□□□□□ -2.01
CPSF7Q8N684 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.51□□□□□ -2.01
CPSF7Q8N684 AC011712.1-201ENST00000588959 234 ntBASIC2.51□□□□□ -2.01
CPSF7Q8N684 FAM157A-202ENST00000615155 405 ntBASIC2.51□□□□□ -2.01
CPSF7Q8N684 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.51□□□□□ -2.01
CPSF7Q8N684 U4.7-201ENST00000638126 106 ntBASIC2.51□□□□□ -2.01
CPSF7Q8N684 AC099654.14-201ENST00000638599 341 ntBASIC2.51□□□□□ -2.01
CPSF7Q8N684 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CPSF7Q8N684 AC131280.1-202ENST00000624067 4211 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CPSF7Q8N684 Y_RNA.72-201ENST00000362894 103 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 Y_RNA.390-201ENST00000383932 102 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 RNU6-214P-201ENST00000384130 107 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 MIR9-1-201ENST00000385198 89 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 AL133475.1-201ENST00000404414 305 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.5□□□□□ -2.01
CPSF7Q8N684 AL359672.1-201ENST00000442302 409 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 RPL7P12-201ENST00000446719 750 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.5□□□□□ -2.01
CPSF7Q8N684 MTCO2P30-201ENST00000503662 364 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 MTCYBP40-201ENST00000509390 1135 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 SNORA31.6-201ENST00000516241 130 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 RN7SKP256-201ENST00000517201 314 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.5□□□□□ -2.01
CPSF7Q8N684 AC107953.1-201ENST00000522216 297 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 AP005597.4-201ENST00000526762 229 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.5□□□□□ -2.01
CPSF7Q8N684 MIR5194-201ENST00000582634 120 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
CPSF7Q8N684 uc_338.14-201ENST00000613162 166 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 AC009248.2-201ENST00000619826 254 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 AL359757.2-201ENST00000624309 274 ntBASIC2.5□□□□□ -2.01
CPSF7Q8N684 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.5□□□□□ -2.01
CPSF7Q8N684 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.5□□□□□ -2.01
CPSF7Q8N684 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms