Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 SNORD114-30-201ENST00000364448 72 ntBASIC2.59□□□□□ -1.99
NME8Q8N427 RNU4-24P-201ENST00000364565 139 ntBASIC2.59□□□□□ -1.99
NME8Q8N427 RNU6-1274P-201ENST00000384557 107 ntBASIC2.59□□□□□ -1.99
NME8Q8N427 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
NME8Q8N427 MTND2P29-201ENST00000438595 412 ntBASIC2.59□□□□□ -1.99
NME8Q8N427 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.59□□□□□ -1.99
NME8Q8N427 RPL39P29-201ENST00000447779 157 ntBASIC2.59□□□□□ -1.99
NME8Q8N427 snoU13.15-201ENST00000459407 104 ntBASIC2.59□□□□□ -1.99
NME8Q8N427 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NME8Q8N427 AP003392.2-201ENST00000527269 208 ntBASIC2.59□□□□□ -1.99
NME8Q8N427 AC026464.5-201ENST00000562497 722 ntBASIC2.59□□□□□ -1.99
NME8Q8N427 AC233702.2-202ENST00000562547 291 ntBASIC2.59□□□□□ -1.99
NME8Q8N427 LRRC37A5P-203ENST00000580181 585 ntBASIC2.59□□□□□ -1.99
NME8Q8N427 MIR3941-201ENST00000582572 103 ntBASIC2.59□□□□□ -1.99
NME8Q8N427 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.59□□□□□ -1.99
NME8Q8N427 AC008945.2-201ENST00000606056 604 ntBASIC2.59□□□□□ -1.99
NME8Q8N427 AL137847.3-201ENST00000611521 109 ntBASIC2.59□□□□□ -1.99
NME8Q8N427 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.59□□□□□ -1.99
NME8Q8N427 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
NME8Q8N427 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -2
NME8Q8N427 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NME8Q8N427 RNU6-181P-201ENST00000363225 107 ntBASIC2.58□□□□□ -2
NME8Q8N427 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NME8Q8N427 BTF3P7-201ENST00000407097 488 ntBASIC2.58□□□□□ -2
NME8Q8N427 RNU2-66P-201ENST00000410650 161 ntBASIC2.58□□□□□ -2
NME8Q8N427 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.58□□□□□ -2
NME8Q8N427 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.58□□□□□ -2
NME8Q8N427 MTCO2P18-201ENST00000457151 658 ntBASIC2.58□□□□□ -2
NME8Q8N427 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.58□□□□□ -2
NME8Q8N427 snoU13.26-201ENST00000459452 105 ntBASIC2.58□□□□□ -2
NME8Q8N427 RPL30P12-201ENST00000474666 353 ntBASIC2.58□□□□□ -2
NME8Q8N427 MTCYBP40-201ENST00000509390 1135 ntBASIC2.58□□□□□ -2
NME8Q8N427 AC107222.1-201ENST00000510899 637 ntBASIC2.58□□□□□ -2
NME8Q8N427 RNU1-86P-201ENST00000516108 154 ntBASIC2.58□□□□□ -2
NME8Q8N427 RNU1-107P-201ENST00000516617 154 ntBASIC2.58□□□□□ -2
NME8Q8N427 RNU6-445P-201ENST00000516949 107 ntBASIC2.58□□□□□ -2
NME8Q8N427 AC007375.1-201ENST00000554513 578 ntBASIC2.58□□□□□ -2
NME8Q8N427 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.58□□□□□ -2
NME8Q8N427 AC087683.1-201ENST00000591187 441 ntBASIC2.58□□□□□ -2
NME8Q8N427 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NME8Q8N427 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
NME8Q8N427 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
NME8Q8N427 Y_RNA.367-201ENST00000365544 101 ntBASIC2.57□□□□□ -2
NME8Q8N427 Y_RNA.409-201ENST00000383990 98 ntBASIC2.57□□□□□ -2
NME8Q8N427 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
NME8Q8N427 RNA5SP212-201ENST00000391223 107 ntBASIC2.57□□□□□ -2
NME8Q8N427 RNU2-9P-201ENST00000410194 145 ntBASIC2.57□□□□□ -2
NME8Q8N427 RNA5SP450-201ENST00000411206 102 ntBASIC2.57□□□□□ -2
NME8Q8N427 HMGN2P38-201ENST00000423806 265 ntBASIC2.57□□□□□ -2
NME8Q8N427 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.57□□□□□ -2
NME8Q8N427 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.57□□□□□ -2
NME8Q8N427 GMFBP1-201ENST00000467831 427 ntBASIC2.57□□□□□ -2
NME8Q8N427 MTND3P5-201ENST00000512798 333 ntBASIC2.57□□□□□ -2
NME8Q8N427 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.57□□□□□ -2
NME8Q8N427 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.57□□□□□ -2
NME8Q8N427 RNU6-377P-201ENST00000515965 102 ntBASIC2.57□□□□□ -2
NME8Q8N427 PRELID2P1-201ENST00000552837 301 ntBASIC2.57□□□□□ -2
NME8Q8N427 AL096840.1-201ENST00000603287 93 ntBASIC2.57□□□□□ -2
NME8Q8N427 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
NME8Q8N427 AC022202.1-201ENST00000613515 211 ntBASIC2.57□□□□□ -2
NME8Q8N427 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.57□□□□□ -2
NME8Q8N427 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.57□□□□□ -2
NME8Q8N427 SNORA62.1-201ENST00000364287 154 ntBASIC2.56□□□□□ -2
NME8Q8N427 Y_RNA.480-201ENST00000384364 102 ntBASIC2.56□□□□□ -2
NME8Q8N427 SNORD14D-201ENST00000384390 87 ntBASIC2.56□□□□□ -2
NME8Q8N427 Y_RNA.517-201ENST00000384551 106 ntBASIC2.56□□□□□ -2
NME8Q8N427 RNU6-550P-201ENST00000391057 101 ntBASIC2.56□□□□□ -2
NME8Q8N427 HMGB3P2-201ENST00000411913 584 ntBASIC2.56□□□□□ -2
NME8Q8N427 MTND3P17-201ENST00000416968 344 ntBASIC2.56□□□□□ -2
NME8Q8N427 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.56□□□□□ -2
NME8Q8N427 AL596276.1-201ENST00000434465 418 ntBASIC2.56□□□□□ -2
NME8Q8N427 FTH1P25-201ENST00000447665 469 ntBASIC2.56□□□□□ -2
NME8Q8N427 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.56□□□□□ -2
NME8Q8N427 C1DP4-201ENST00000455429 424 ntBASIC2.56□□□□□ -2
NME8Q8N427 UBL5P3-201ENST00000475112 231 ntBASIC2.56□□□□□ -2
NME8Q8N427 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.56□□□□□ -2
NME8Q8N427 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.56□□□□□ -2
NME8Q8N427 MTND3P25-201ENST00000509243 135 ntBASIC2.56□□□□□ -2
NME8Q8N427 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.56□□□□□ -2
NME8Q8N427 IGKV3-31-201ENST00000523109 329 ntBASIC2.56□□□□□ -2
NME8Q8N427 AC024909.2-201ENST00000553035 286 ntBASIC2.56□□□□□ -2
NME8Q8N427 AC091805.2-201ENST00000603848 235 ntBASIC2.56□□□□□ -2
NME8Q8N427 CYP2C61P-201ENST00000604072 290 ntBASIC2.56□□□□□ -2
NME8Q8N427 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.56□□□□□ -2
NME8Q8N427 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.56□□□□□ -2
NME8Q8N427 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
NME8Q8N427 AL359851.1-201ENST00000569460 4997 ntBASIC2.55□□□□□ -2
NME8Q8N427 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
NME8Q8N427 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.55□□□□□ -2
NME8Q8N427 RNU4-56P-201ENST00000364700 142 ntBASIC2.55□□□□□ -2
NME8Q8N427 RNU6-456P-201ENST00000384493 107 ntBASIC2.55□□□□□ -2
NME8Q8N427 AL663109.1-201ENST00000411498 844 ntBASIC2.55□□□□□ -2
NME8Q8N427 MTND5P6-201ENST00000422338 1798 ntBASIC2.55□□□□□ -2
NME8Q8N427 MTCO2P11-201ENST00000431069 680 ntBASIC2.55□□□□□ -2
NME8Q8N427 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.55□□□□□ -2
NME8Q8N427 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.55□□□□□ -2
NME8Q8N427 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.55□□□□□ -2
NME8Q8N427 RPL23AP3-201ENST00000453844 468 ntBASIC2.55□□□□□ -2
NME8Q8N427 MTCO3P9-201ENST00000506989 781 ntBASIC2.55□□□□□ -2
NME8Q8N427 RNU6-405P-201ENST00000516637 110 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms