Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
LINC01561Q8N1V8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
LINC01561Q8N1V8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LINC01561Q8N1V8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 RNA5SP374-201ENST00000362939 125 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 SNORD32B-201ENST00000364460 84 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 U8.8-201ENST00000365399 135 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 RNVU1-14-201ENST00000384770 164 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 AL445529.1-201ENST00000398713 389 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 AL033519.2-201ENST00000403958 392 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 MTCYBP2-201ENST00000407745 171 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 MIR1294-201ENST00000408503 142 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 RNU2-66P-201ENST00000410650 161 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 RNU2-16P-201ENST00000410712 136 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 AP000275.1-201ENST00000411943 390 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 MTND1P23-201ENST00000416931 372 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 MORF4L1P6-201ENST00000418771 268 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 USP9YP20-201ENST00000419224 558 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 RPL35AP12-201ENST00000425362 338 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 CCDC34P1-201ENST00000507441 517 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 RNU4-29P-201ENST00000515943 174 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 CENPUP1-201ENST00000526649 1202 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 AP000889.2-201ENST00000532684 490 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 TRAV32-201ENST00000553993 340 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 MIR5583-1-201ENST00000580941 59 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 VN1R80P-201ENST00000597126 338 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 AC006023.1-201ENST00000603944 259 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 AC107304.1-201ENST00000604229 296 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 AP001836.1-201ENST00000604675 523 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 RNU6-85P-201ENST00000605989 107 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 AC104073.3-201ENST00000610942 955 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 AL162373.1-201ENST00000620433 407 ntBASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01561Q8N1V8 AC009487.4-201ENST00000624969 3585 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 RNU4-15P-201ENST00000362613 141 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 Y_RNA.126-201ENST00000363382 111 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 SNORA41-201ENST00000384675 132 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 RNA5SP219-201ENST00000390940 113 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AL357139.1-201ENST00000407792 426 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AL158823.1-201ENST00000418441 478 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AL121601.2-201ENST00000438019 707 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AL353689.1-201ENST00000438895 199 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AC087854.1-201ENST00000519706 414 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AC087241.2-201ENST00000535801 324 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AC016256.1-201ENST00000547971 354 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 HSPE1P4-201ENST00000550617 308 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AC103996.1-201ENST00000555468 102 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 MIR4287-201ENST00000579398 78 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 SRGNP1-201ENST00000603392 451 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AL160281.1-201ENST00000605307 311 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AC004908.3-201ENST00000610248 625 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 Z99129.1-201ENST00000612510 255 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AC012314.7-201ENST00000619693 93 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 MIR6075-201ENST00000620782 95 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AL136221.1-201ENST00000621449 509 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 AC233981.2-201ENST00000611524 1614 ntBASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LINC01561Q8N1V8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.13
LINC01561Q8N1V8 RNU6-1085P-201ENST00000363576 107 ntBASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 SNORD37.1-201ENST00000390968 65 ntBASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 BTF3L4P2-201ENST00000392798 346 ntBASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 MIR1262-201ENST00000408276 93 ntBASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 POLHP1-201ENST00000411806 470 ntBASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 AL590135.1-201ENST00000422215 156 ntBASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 AC019205.3-201ENST00000424573 156 ntBASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 RPL7P54-201ENST00000438336 674 ntBASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 AC016700.2-201ENST00000446011 156 ntBASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 RPL23AP3-201ENST00000453844 468 ntBASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 TPTE2P5-203ENST00000458118 728 ntBASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 SRRM1P2-201ENST00000464531 1192 ntBASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 AC015911.1-201ENST00000495111 156 ntBASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 Y_RNA.654-201ENST00000497848 106 ntBASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 AC096725.1-201ENST00000514266 313 ntBASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 MIR514B-201ENST00000516774 80 ntBASIC1.71□□□□□ -2.14
LINC01561Q8N1V8 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms