Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 SNORA84-201ENST00000459229 133 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 MTCO2P24-201ENST00000515611 426 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 RNA5SP112-201ENST00000515937 99 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 SNORA67.7-201ENST00000516664 135 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 RNU6-612P-201ENST00000516909 102 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 SCARNA11.3-201ENST00000517276 130 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.21□□□□□ -1.9
KRT78Q8N1N4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.21□□□□□ -1.9
KRT78Q8N1N4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.21□□□□□ -1.9
KRT78Q8N1N4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.21□□□□□ -1.9
KRT78Q8N1N4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.21□□□□□ -1.9
KRT78Q8N1N4 CYP2C61P-201ENST00000604072 290 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 uc_338.1-201ENST00000612113 180 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 AC090617.7-201ENST00000623952 126 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.21□□□□□ -1.9
KRT78Q8N1N4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRT78Q8N1N4 AL109809.4-201ENST00000603520 2185 ntBASIC3.21□□□□□ -1.9
KRT78Q8N1N4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.21□□□□□ -1.9
KRT78Q8N1N4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRT78Q8N1N4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.2□□□□□ -1.9
KRT78Q8N1N4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.2□□□□□ -1.9
KRT78Q8N1N4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRT78Q8N1N4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
KRT78Q8N1N4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.2□□□□□ -1.9
KRT78Q8N1N4 Y_RNA.148-201ENST00000363557 117 ntBASIC3.2□□□□□ -1.9
KRT78Q8N1N4 Y_RNA.151-201ENST00000363566 112 ntBASIC3.2□□□□□ -1.9
KRT78Q8N1N4 AP002088.1-201ENST00000382740 395 ntBASIC3.2□□□□□ -1.9
KRT78Q8N1N4 AL513475.1-201ENST00000406602 315 ntBASIC3.2□□□□□ -1.9
KRT78Q8N1N4 MIR548K-201ENST00000408406 116 ntBASIC3.2□□□□□ -1.9
KRT78Q8N1N4 MIR548F4-201ENST00000408515 105 ntBASIC3.2□□□□□ -1.9
KRT78Q8N1N4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.2□□□□□ -1.9
KRT78Q8N1N4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.2□□□□□ -1.9
KRT78Q8N1N4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.2□□□□□ -1.9
KRT78Q8N1N4 AC090897.2-201ENST00000581715 130 ntBASIC3.2□□□□□ -1.9
KRT78Q8N1N4 MIR4276-201ENST00000584832 70 ntBASIC3.2□□□□□ -1.9
KRT78Q8N1N4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.2□□□□□ -1.9
KRT78Q8N1N4 AC012493.2-201ENST00000595083 291 ntBASIC3.2□□□□□ -1.9
KRT78Q8N1N4 AC010620.2-201ENST00000600135 313 ntBASIC3.2□□□□□ -1.9
KRT78Q8N1N4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.2□□□□□ -1.9
KRT78Q8N1N4 AC018889.1-201ENST00000605372 397 ntBASIC3.2□□□□□ -1.9
KRT78Q8N1N4 AC005046.1-201ENST00000608515 625 ntBASIC3.2□□□□□ -1.9
KRT78Q8N1N4 AL591516.1-201ENST00000611326 274 ntBASIC3.2□□□□□ -1.9
KRT78Q8N1N4 AC241585.2-209ENST00000638217 143 ntBASIC3.2□□□□□ -1.9
KRT78Q8N1N4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.2□□□□□ -1.9
KRT78Q8N1N4 Z83843.1-201ENST00000604070 3685 ntBASIC3.2□□□□□ -1.9
KRT78Q8N1N4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRT78Q8N1N4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.2□□□□□ -1.9
KRT78Q8N1N4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
KRT78Q8N1N4 RNU6-805P-201ENST00000365643 106 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 RNU6-26P-201ENST00000383985 107 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 RNU6-1222P-201ENST00000384615 107 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 MIR517A-201ENST00000385001 87 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 BTF3L4P2-201ENST00000392798 346 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 AL512633.1-201ENST00000399931 655 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 RNU6-985P-201ENST00000410182 104 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 RNA5SP44-201ENST00000410446 133 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 AC114482.1-201ENST00000418010 247 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KRT78Q8N1N4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.19□□□□□ -1.9
KRT78Q8N1N4 MTND3P9-201ENST00000429526 346 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 BX679664.1-201ENST00000434429 253 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 CST9LP2-201ENST00000437612 320 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.19□□□□□ -1.9
KRT78Q8N1N4 MTCO3P10-201ENST00000455912 772 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 RPL30P15-201ENST00000457129 321 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 RPL21P10-201ENST00000463521 490 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 AC112771.1-201ENST00000463581 102 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 RPL30P12-201ENST00000474666 353 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 RN7SL293P-201ENST00000481765 281 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.19□□□□□ -1.9
KRT78Q8N1N4 RN7SL283P-201ENST00000489055 303 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 AC097462.2-201ENST00000504623 481 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 ACA59.1-201ENST00000515966 143 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 SNORA31.6-201ENST00000516241 130 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 RN7SKP295-201ENST00000517264 153 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.19□□□□□ -1.9
KRT78Q8N1N4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.19□□□□□ -1.9
KRT78Q8N1N4 MIR4680-201ENST00000580906 66 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.19□□□□□ -1.9
KRT78Q8N1N4 AL161423.1-201ENST00000613700 262 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 U4.1-201ENST00000620349 87 ntBASIC3.19□□□□□ -1.9
KRT78Q8N1N4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.19□□□□□ -1.9
KRT78Q8N1N4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.19□□□□□ -1.9
KRT78Q8N1N4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
KRT78Q8N1N4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
KRT78Q8N1N4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRT78Q8N1N4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRT78Q8N1N4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRT78Q8N1N4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.18□□□□□ -1.9
KRT78Q8N1N4 RNU6-212P-201ENST00000362642 104 ntBASIC3.18□□□□□ -1.9
KRT78Q8N1N4 Y_RNA.47-201ENST00000362697 108 ntBASIC3.18□□□□□ -1.9
KRT78Q8N1N4 Y_RNA.188-201ENST00000363952 111 ntBASIC3.18□□□□□ -1.9
KRT78Q8N1N4 RNU6-306P-201ENST00000384617 107 ntBASIC3.18□□□□□ -1.9
KRT78Q8N1N4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
KRT78Q8N1N4 AL513477.1-202ENST00000417061 214 ntBASIC3.18□□□□□ -1.9
KRT78Q8N1N4 MTCYBP10-201ENST00000424905 650 ntBASIC3.18□□□□□ -1.9
KRT78Q8N1N4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.18□□□□□ -1.9
KRT78Q8N1N4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.18□□□□□ -1.9
KRT78Q8N1N4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.18□□□□□ -1.9
KRT78Q8N1N4 RPL39P29-201ENST00000447779 157 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms