Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.51□□□□□ -1.69
SIX5Q8N196 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
SIX5Q8N196 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX5Q8N196 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SIX5Q8N196 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIX5Q8N196 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.5□□□□□ -1.69
SIX5Q8N196 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SIX5Q8N196 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIX5Q8N196 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIX5Q8N196 MIR448-201ENST00000362131 111 ntBASIC4.5□□□□□ -1.69
SIX5Q8N196 MIR3065-201ENST00000390137 79 ntBASIC4.5□□□□□ -1.69
SIX5Q8N196 SNORA40.19-201ENST00000390846 128 ntBASIC4.5□□□□□ -1.69
SIX5Q8N196 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.5□□□□□ -1.69
SIX5Q8N196 MIR548I2-201ENST00000408348 149 ntBASIC4.5□□□□□ -1.69
SIX5Q8N196 AC009237.7-201ENST00000447357 229 ntBASIC4.5□□□□□ -1.69
SIX5Q8N196 AL441985.1-201ENST00000457727 251 ntBASIC4.5□□□□□ -1.69
SIX5Q8N196 AC007215.1-201ENST00000464893 276 ntBASIC4.5□□□□□ -1.69
SIX5Q8N196 RNY3P16-201ENST00000516338 101 ntBASIC4.5□□□□□ -1.69
SIX5Q8N196 RNU6-155P-201ENST00000516347 100 ntBASIC4.5□□□□□ -1.69
SIX5Q8N196 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIX5Q8N196 RPL7P50-201ENST00000600588 727 ntBASIC4.5□□□□□ -1.69
SIX5Q8N196 SNRPGP20-201ENST00000604477 205 ntBASIC4.5□□□□□ -1.69
SIX5Q8N196 AC004467.1-201ENST00000615678 330 ntBASIC4.5□□□□□ -1.69
SIX5Q8N196 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.5□□□□□ -1.69
SIX5Q8N196 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.5□□□□□ -1.69
SIX5Q8N196 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.5□□□□□ -1.69
SIX5Q8N196 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIX5Q8N196 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.5□□□□□ -1.69
SIX5Q8N196 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIX5Q8N196 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.5□□□□□ -1.69
SIX5Q8N196 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIX5Q8N196 AC010733.2-201ENST00000589496 5702 ntBASIC4.5□□□□□ -1.69
SIX5Q8N196 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.5□□□□□ -1.69
SIX5Q8N196 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIX5Q8N196 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIX5Q8N196 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SIX5Q8N196 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.49□□□□□ -1.69
SIX5Q8N196 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.49□□□□□ -1.69
SIX5Q8N196 Y_RNA.8-201ENST00000362353 102 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 RNU4-80P-201ENST00000363200 141 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 RNY1P5-201ENST00000383890 115 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 U3.26-201ENST00000391236 204 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 PTMAP5-201ENST00000393073 333 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 PTGES3P4-201ENST00000426243 356 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.49□□□□□ -1.69
SIX5Q8N196 snoU13.28-201ENST00000459235 104 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 AC091179.3-201ENST00000474761 144 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 RPL30P14-201ENST00000482744 348 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 RN7SL691P-201ENST00000494487 301 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 AC006499.6-201ENST00000511169 607 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 RNA5SP309-201ENST00000516670 106 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.49□□□□□ -1.69
SIX5Q8N196 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.49□□□□□ -1.69
SIX5Q8N196 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.49□□□□□ -1.69
SIX5Q8N196 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.49□□□□□ -1.69
SIX5Q8N196 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.49□□□□□ -1.69
SIX5Q8N196 AC079587.1-201ENST00000603846 277 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 AC015813.4-201ENST00000610469 179 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 AC039056.2-201ENST00000622261 511 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 AC092628.2-201ENST00000622492 339 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 CR392039.5-201ENST00000623201 510 ntBASIC4.49□□□□□ -1.69
SIX5Q8N196 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SIX5Q8N196 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.49□□□□□ -1.69
SIX5Q8N196 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SIX5Q8N196 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SIX5Q8N196 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SIX5Q8N196 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SIX5Q8N196 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX5Q8N196 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SIX5Q8N196 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SIX5Q8N196 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SIX5Q8N196 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SIX5Q8N196 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX5Q8N196 RNU6-727P-201ENST00000363592 107 ntBASIC4.48□□□□□ -1.69
SIX5Q8N196 RNU6-19P-201ENST00000384718 107 ntBASIC4.48□□□□□ -1.69
SIX5Q8N196 MIR549A-201ENST00000385268 96 ntBASIC4.48□□□□□ -1.69
SIX5Q8N196 RNU6-1248P-201ENST00000391096 64 ntBASIC4.48□□□□□ -1.69
SIX5Q8N196 AL591034.1-201ENST00000407447 340 ntBASIC4.48□□□□□ -1.69
SIX5Q8N196 YME1L1P1-201ENST00000429435 297 ntBASIC4.48□□□□□ -1.69
SIX5Q8N196 IFNA11P-201ENST00000446352 526 ntBASIC4.48□□□□□ -1.69
SIX5Q8N196 AIG1P1-201ENST00000503376 148 ntBASIC4.48□□□□□ -1.69
SIX5Q8N196 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX5Q8N196 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX5Q8N196 AC055872.1-201ENST00000570978 278 ntBASIC4.48□□□□□ -1.69
SIX5Q8N196 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX5Q8N196 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX5Q8N196 AC004832.4-201ENST00000608952 331 ntBASIC4.48□□□□□ -1.69
SIX5Q8N196 AC069200.1-201ENST00000609511 323 ntBASIC4.48□□□□□ -1.69
SIX5Q8N196 AC104465.1-201ENST00000611365 139 ntBASIC4.48□□□□□ -1.69
SIX5Q8N196 MIR6076-201ENST00000617521 113 ntBASIC4.48□□□□□ -1.69
SIX5Q8N196 AC091932.3-201ENST00000624223 323 ntBASIC4.48□□□□□ -1.69
SIX5Q8N196 AC106871.1-201ENST00000568324 3102 ntBASIC4.48□□□□□ -1.69
SIX5Q8N196 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.48□□□□□ -1.69
SIX5Q8N196 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SIX5Q8N196 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX5Q8N196 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.47□□□□□ -1.69
SIX5Q8N196 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SIX5Q8N196 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX5Q8N196 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms