Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC023824.2-201ENST00000566185 400 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 MIR4765-201ENST00000585007 77 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 MIR4424-201ENST00000585257 86 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 AL021997.1-201ENST00000605757 193 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 RNU6-6P-201ENST00000606623 107 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 Z82243.1-201ENST00000609432 473 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 MIR6132-201ENST00000622083 109 ntBASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC60Q8IWA6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC60Q8IWA6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC60Q8IWA6 AC080128.1-201ENST00000474389 1917 ntBASIC2.4□□□□□ -2.02
CCDC60Q8IWA6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC60Q8IWA6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC60Q8IWA6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC60Q8IWA6 RNU6-942P-201ENST00000363002 107 ntBASIC2.4□□□□□ -2.03
CCDC60Q8IWA6 RNU6-266P-201ENST00000364225 107 ntBASIC2.4□□□□□ -2.03
CCDC60Q8IWA6 RNU4-20P-201ENST00000365601 151 ntBASIC2.4□□□□□ -2.03
CCDC60Q8IWA6 MIR218-1-201ENST00000384999 110 ntBASIC2.4□□□□□ -2.03
CCDC60Q8IWA6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC60Q8IWA6 snoU13.26-201ENST00000459452 105 ntBASIC2.4□□□□□ -2.03
CCDC60Q8IWA6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC60Q8IWA6 RPL21P99-201ENST00000480369 423 ntBASIC2.4□□□□□ -2.03
CCDC60Q8IWA6 AC107222.1-201ENST00000510899 637 ntBASIC2.4□□□□□ -2.03
CCDC60Q8IWA6 ZNF519P2-201ENST00000557032 169 ntBASIC2.4□□□□□ -2.03
CCDC60Q8IWA6 MIR3199-1-201ENST00000582434 88 ntBASIC2.4□□□□□ -2.03
CCDC60Q8IWA6 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC60Q8IWA6 AC068137.3-201ENST00000639191 341 ntBASIC2.4□□□□□ -2.03
CCDC60Q8IWA6 AC073869.6-201ENST00000640656 341 ntBASIC2.4□□□□□ -2.03
CCDC60Q8IWA6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC60Q8IWA6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 MTND4P27-201ENST00000450813 1354 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 Y_RNA.6-201ENST00000362350 114 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 Y_RNA.9-201ENST00000362354 101 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 Y_RNA.38-201ENST00000362617 102 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 RNU5E-7P-201ENST00000365290 117 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 Y_RNA.399-201ENST00000383955 105 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 RNU6-38P-201ENST00000384085 107 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 Y_RNA.480-201ENST00000384364 102 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 RNU6-192P-201ENST00000391253 100 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 MIR548F1-201ENST00000408667 84 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 AL365400.1-201ENST00000431854 640 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 MTND3P16-201ENST00000452205 344 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 RNU6-333P-201ENST00000459117 107 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 SNORA43.2-201ENST00000516652 128 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 RNU1-104P-201ENST00000517280 175 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 MTND1P35-201ENST00000526739 508 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 AC109635.3-201ENST00000529536 185 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 AL157687.1-201ENST00000554853 619 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 AL118558.2-201ENST00000556294 238 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 AC092747.3-201ENST00000603769 301 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 AC123912.5-201ENST00000605470 343 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 uc_338.14-201ENST00000613162 166 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 MIR1321-201ENST00000637766 79 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 AL359854.1-201ENST00000614203 1594 ntBASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC60Q8IWA6 RBBP8P1-201ENST00000449447 1844 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 RNU6-78P-201ENST00000362897 107 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 SNORA67.1-201ENST00000364749 141 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 Y_RNA.378-201ENST00000365652 113 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 Y_RNA.402-201ENST00000383972 102 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 SNORD115-47-201ENST00000391226 86 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 AC006026.2-201ENST00000457376 180 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 AC112771.1-201ENST00000463581 102 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 RPL36AP48-201ENST00000485521 314 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 AC023141.11-201ENST00000508864 202 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 RNU6-718P-201ENST00000516166 105 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 SNORA25.17-201ENST00000517184 124 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 CENPUP1-201ENST00000526649 1202 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 MTCO3P23-201ENST00000561363 289 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 AL138976.2-201ENST00000563989 694 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 VN1R80P-201ENST00000597126 338 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 AL109809.4-201ENST00000603520 2185 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 MIR6715A-201ENST00000615929 79 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 U4.5-201ENST00000617137 123 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 Z69720.2-201ENST00000624755 279 ntBASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC60Q8IWA6 FER-210ENST00000628534 558 ntTSL 5 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms