Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PRPF39Q86UA1 MIR21-201ENST00000362134 72 ntBASIC2.5□□□□□ -2.01
PRPF39Q86UA1 Y_RNA.40-201ENST00000362645 93 ntBASIC2.5□□□□□ -2.01
PRPF39Q86UA1 SNORA3A-201ENST00000364113 130 ntBASIC2.5□□□□□ -2.01
PRPF39Q86UA1 SNORA70B-201ENST00000384210 135 ntBASIC2.5□□□□□ -2.01
PRPF39Q86UA1 RNA5SP270-201ENST00000411361 118 ntBASIC2.5□□□□□ -2.01
PRPF39Q86UA1 MORF4L1P6-201ENST00000418771 268 ntBASIC2.5□□□□□ -2.01
PRPF39Q86UA1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PRPF39Q86UA1 CR769767.1-201ENST00000436337 346 ntBASIC2.5□□□□□ -2.01
PRPF39Q86UA1 FDX1P2-201ENST00000450769 375 ntBASIC2.5□□□□□ -2.01
PRPF39Q86UA1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PRPF39Q86UA1 RNU6-261P-201ENST00000459506 102 ntBASIC2.5□□□□□ -2.01
PRPF39Q86UA1 RPL9P6-201ENST00000492764 598 ntBASIC2.5□□□□□ -2.01
PRPF39Q86UA1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.5□□□□□ -2.01
PRPF39Q86UA1 AK3P2-201ENST00000507976 429 ntBASIC2.5□□□□□ -2.01
PRPF39Q86UA1 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.5□□□□□ -2.01
PRPF39Q86UA1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.5□□□□□ -2.01
PRPF39Q86UA1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.5□□□□□ -2.01
PRPF39Q86UA1 AC104383.1-201ENST00000530297 370 ntBASIC2.5□□□□□ -2.01
PRPF39Q86UA1 IMMP1LP2-201ENST00000552954 492 ntBASIC2.5□□□□□ -2.01
PRPF39Q86UA1 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.5□□□□□ -2.01
PRPF39Q86UA1 AC091135.1-201ENST00000585943 307 ntBASIC2.5□□□□□ -2.01
PRPF39Q86UA1 RNU6-85P-201ENST00000605989 107 ntBASIC2.5□□□□□ -2.01
PRPF39Q86UA1 AC124864.2-201ENST00000624736 186 ntBASIC2.5□□□□□ -2.01
PRPF39Q86UA1 AC069528.2-201ENST00000624849 1991 ntBASIC2.5□□□□□ -2.01
PRPF39Q86UA1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
PRPF39Q86UA1 RNU6-428P-201ENST00000362942 107 ntBASIC2.49□□□□□ -2.01
PRPF39Q86UA1 RNU4-66P-201ENST00000365199 138 ntBASIC2.49□□□□□ -2.01
PRPF39Q86UA1 SNORA69-201ENST00000383895 132 ntBASIC2.49□□□□□ -2.01
PRPF39Q86UA1 RNU1-148P-201ENST00000384472 162 ntBASIC2.49□□□□□ -2.01
PRPF39Q86UA1 RNU6-1222P-201ENST00000384615 107 ntBASIC2.49□□□□□ -2.01
PRPF39Q86UA1 MIR95-201ENST00000385072 81 ntBASIC2.49□□□□□ -2.01
PRPF39Q86UA1 CBX3P9-201ENST00000402326 552 ntBASIC2.49□□□□□ -2.01
PRPF39Q86UA1 AL591034.2-201ENST00000402839 359 ntBASIC2.49□□□□□ -2.01
PRPF39Q86UA1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.49□□□□□ -2.01
PRPF39Q86UA1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.49□□□□□ -2.01
PRPF39Q86UA1 AC016907.1-201ENST00000419483 435 ntBASIC2.49□□□□□ -2.01
PRPF39Q86UA1 AL590556.1-201ENST00000423231 483 ntBASIC2.49□□□□□ -2.01
PRPF39Q86UA1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.49□□□□□ -2.01
PRPF39Q86UA1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.49□□□□□ -2.01
PRPF39Q86UA1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.49□□□□□ -2.01
PRPF39Q86UA1 AL122001.1-201ENST00000457027 370 ntBASIC2.49□□□□□ -2.01
PRPF39Q86UA1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.49□□□□□ -2.01
PRPF39Q86UA1 snoU13.14-201ENST00000459372 104 ntBASIC2.49□□□□□ -2.01
PRPF39Q86UA1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.49□□□□□ -2.01
PRPF39Q86UA1 AC083798.1-201ENST00000472671 131 ntBASIC2.49□□□□□ -2.01
PRPF39Q86UA1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.49□□□□□ -2.01
PRPF39Q86UA1 CYCSP26-201ENST00000534107 320 ntBASIC2.49□□□□□ -2.01
PRPF39Q86UA1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.49□□□□□ -2.01
PRPF39Q86UA1 AC245505.1-201ENST00000556398 224 ntBASIC2.49□□□□□ -2.01
PRPF39Q86UA1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.49□□□□□ -2.01
PRPF39Q86UA1 MIR4446-201ENST00000578505 67 ntBASIC2.49□□□□□ -2.01
PRPF39Q86UA1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.49□□□□□ -2.01
PRPF39Q86UA1 HULC.1-201ENST00000612720 240 ntBASIC2.49□□□□□ -2.01
PRPF39Q86UA1 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.49□□□□□ -2.01
PRPF39Q86UA1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
PRPF39Q86UA1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PRPF39Q86UA1 snoU2_19.1-201ENST00000362361 80 ntBASIC2.48□□□□□ -2.01
PRPF39Q86UA1 RNU4-24P-201ENST00000364565 139 ntBASIC2.48□□□□□ -2.01
PRPF39Q86UA1 RNU1-51P-201ENST00000365345 176 ntBASIC2.48□□□□□ -2.01
PRPF39Q86UA1 Y_RNA.436-201ENST00000384097 102 ntBASIC2.48□□□□□ -2.01
PRPF39Q86UA1 RNU6-1106P-201ENST00000390845 107 ntBASIC2.48□□□□□ -2.01
PRPF39Q86UA1 RNU4-53P-201ENST00000410828 140 ntBASIC2.48□□□□□ -2.01
PRPF39Q86UA1 AF274854.1-201ENST00000413236 615 ntBASIC2.48□□□□□ -2.01
PRPF39Q86UA1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.48□□□□□ -2.01
PRPF39Q86UA1 IFNA11P-201ENST00000446352 526 ntBASIC2.48□□□□□ -2.01
PRPF39Q86UA1 PSPHP1-201ENST00000450062 261 ntBASIC2.48□□□□□ -2.01
PRPF39Q86UA1 RN7SL636P-201ENST00000497504 294 ntBASIC2.48□□□□□ -2.01
PRPF39Q86UA1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.48□□□□□ -2.01
PRPF39Q86UA1 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.48□□□□□ -2.01
PRPF39Q86UA1 SNORA4.4-201ENST00000515921 135 ntBASIC2.48□□□□□ -2.01
PRPF39Q86UA1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.48□□□□□ -2.01
PRPF39Q86UA1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.48□□□□□ -2.01
PRPF39Q86UA1 AC115990.1-201ENST00000526957 301 ntBASIC2.48□□□□□ -2.01
PRPF39Q86UA1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.48□□□□□ -2.01
PRPF39Q86UA1 AL161423.1-201ENST00000613700 262 ntBASIC2.48□□□□□ -2.01
PRPF39Q86UA1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PRPF39Q86UA1 AC245884.12-201ENST00000615364 59 ntBASIC2.48□□□□□ -2.01
PRPF39Q86UA1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.48□□□□□ -2.01
PRPF39Q86UA1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PRPF39Q86UA1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PRPF39Q86UA1 RNU1-23P-201ENST00000363361 144 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 RNU6-336P-201ENST00000364891 107 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 SNORA25B-201ENST00000365507 128 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 RNU6-827P-201ENST00000365553 106 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PRPF39Q86UA1 RNU1-138P-201ENST00000384093 164 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 Y_RNA.517-201ENST00000384551 106 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 MIR29B2-201ENST00000385055 81 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 AL359511.1-201ENST00000402970 211 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.47□□□□□ -2.01
PRPF39Q86UA1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.47□□□□□ -2.01
PRPF39Q86UA1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.47□□□□□ -2.01
PRPF39Q86UA1 MTND1P1-201ENST00000445453 368 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 TPTE2P5-203ENST00000458118 728 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 MTCO3P38-201ENST00000468910 766 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 RPL30P1-201ENST00000488676 339 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 CYCSP27-201ENST00000527643 293 ntBASIC2.47□□□□□ -2.01
PRPF39Q86UA1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.47□□□□□ -2.01
PRPF39Q86UA1 AC104984.5-201ENST00000586878 94 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms