Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AL512844.2-201ENST00000433990 593 ntBASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 AC013470.1-201ENST00000453438 462 ntBASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 RN7SL283P-201ENST00000489055 303 ntBASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 AC018437.1-201ENST00000492214 406 ntBASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 PTP4A1P4-201ENST00000512479 322 ntBASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 SCARNA16.2-201ENST00000516520 172 ntBASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 RNU6-6P-201ENST00000606623 107 ntBASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 FTX_3.1-201ENST00000610451 147 ntBASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 AC138627.2-201ENST00000624202 601 ntBASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 U2.21-201ENST00000637295 81 ntBASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 AC008264.2-201ENST00000610193 3731 ntBASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.53□□□□□ -1.84
UBE3BQ7Z3V4 AC093831.2-201ENST00000624393 3427 ntBASIC3.53□□□□□ -1.85
UBE3BQ7Z3V4 AC009487.2-201ENST00000420969 6821 ntBASIC3.53□□□□□ -1.85
UBE3BQ7Z3V4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 FTLP6-201ENST00000355274 422 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 Y_RNA.2-201ENST00000362330 96 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 RNU1-35P-201ENST00000362782 153 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 RNU6-331P-201ENST00000384724 107 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 AL138827.1-201ENST00000402666 306 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 RNU6-325P-201ENST00000411132 105 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 AL117339.3-201ENST00000418733 162 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 PGBD4P6-201ENST00000421501 610 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 AL139281.1-201ENST00000422120 335 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 AC011816.1-201ENST00000441346 546 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 RNU6-1037P-201ENST00000459571 107 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 RPL23AP45-201ENST00000476406 468 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 RPL23AP94-201ENST00000512518 302 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 RPL12P50-201ENST00000603116 116 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 AC136443.5-201ENST00000603741 370 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 AL121917.1-203ENST00000605534 577 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 AC083806.3-201ENST00000614016 455 ntBASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBE3BQ7Z3V4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBE3BQ7Z3V4 MIR34A-201ENST00000385130 110 ntBASIC3.51□□□□□ -1.85
UBE3BQ7Z3V4 RN7SKP58-201ENST00000411010 305 ntBASIC3.51□□□□□ -1.85
UBE3BQ7Z3V4 AC007560.1-201ENST00000426912 237 ntBASIC3.51□□□□□ -1.85
UBE3BQ7Z3V4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.51□□□□□ -1.85
UBE3BQ7Z3V4 AC008571.1-201ENST00000467232 300 ntBASIC3.51□□□□□ -1.85
UBE3BQ7Z3V4 AC109479.2-201ENST00000517842 174 ntBASIC3.51□□□□□ -1.85
UBE3BQ7Z3V4 AC109446.1-201ENST00000566172 220 ntBASIC3.51□□□□□ -1.85
UBE3BQ7Z3V4 AC068831.7-201ENST00000616954 363 ntBASIC3.51□□□□□ -1.85
UBE3BQ7Z3V4 AC027309.3-201ENST00000623419 351 ntBASIC3.51□□□□□ -1.85
UBE3BQ7Z3V4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBE3BQ7Z3V4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 AC092593.1-201ENST00000515413 1815 ntBASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 Y_RNA.496-201ENST00000384444 101 ntBASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 MIR512-1-201ENST00000384913 84 ntBASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 RNU6-1106P-201ENST00000390845 107 ntBASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 NUP35P1-201ENST00000422734 947 ntBASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 TOMM20P4-201ENST00000427861 435 ntBASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 AC092573.2-201ENST00000434546 243 ntBASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 MTATP6P7-201ENST00000453315 681 ntBASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 RNU6-699P-201ENST00000517081 110 ntBASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 AC008737.2-201ENST00000599446 118 ntBASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 AC008121.1-201ENST00000603244 268 ntBASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 AL161629.2-201ENST00000615347 275 ntBASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.5□□□□□ -1.85
UBE3BQ7Z3V4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 RNU6-778P-201ENST00000363269 103 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 Y_RNA.158-201ENST00000363651 101 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 RNU1-115P-201ENST00000365329 160 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 RNY1P14-201ENST00000384426 108 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 RNU2-52P-201ENST00000410680 190 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 RNA5SP184-201ENST00000411071 108 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 AC008267.5-201ENST00000424928 265 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 AC093151.1-201ENST00000427711 313 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 RPS15AP10-201ENST00000432472 382 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 SNRPEP4-201ENST00000435815 279 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 AL109933.2-201ENST00000452651 260 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 SNORD109B-201ENST00000458961 67 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 SNORD109A-201ENST00000459128 67 ntBASIC3.49□□□□□ -1.85
UBE3BQ7Z3V4 HMGN2P13-201ENST00000476476 274 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms