Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.58□□□□□ -2
C9orf139Q6ZV77 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
C9orf139Q6ZV77 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.58□□□□□ -2
C9orf139Q6ZV77 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
C9orf139Q6ZV77 RNU6-898P-201ENST00000365627 104 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 RNU6-1027P-201ENST00000383998 107 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 RNU6-933P-201ENST00000384424 107 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 RNU6-1035P-201ENST00000384477 107 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 U3.26-201ENST00000391236 204 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 SNORA48.8-201ENST00000391324 134 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 MIR888-201ENST00000401186 77 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 MRPL42P3-201ENST00000401492 326 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 AC245291.1-201ENST00000419501 328 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 RPL23AP50-201ENST00000434149 455 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.58□□□□□ -2
C9orf139Q6ZV77 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.58□□□□□ -2
C9orf139Q6ZV77 AC068781.1-201ENST00000488231 618 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 RPS29P20-201ENST00000489592 171 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 AC097462.2-201ENST00000504623 481 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 MTND4LP22-201ENST00000508209 276 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.58□□□□□ -2
C9orf139Q6ZV77 ACA59.1-201ENST00000515966 143 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 RNU6-307P-201ENST00000516743 106 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 AC109479.2-201ENST00000517842 174 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.58□□□□□ -2
C9orf139Q6ZV77 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.58□□□□□ -2
C9orf139Q6ZV77 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 MIR4680-201ENST00000580906 66 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.58□□□□□ -2
C9orf139Q6ZV77 AL355598.1-201ENST00000604169 202 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 AC005014.2-201ENST00000607795 599 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 AC005046.1-201ENST00000608515 625 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 AC006157.1-201ENST00000611750 366 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 U4.7-201ENST00000638126 106 ntBASIC2.58□□□□□ -2
C9orf139Q6ZV77 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
C9orf139Q6ZV77 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.57□□□□□ -2
C9orf139Q6ZV77 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.57□□□□□ -2
C9orf139Q6ZV77 AC099654.7-201ENST00000635788 2127 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.57□□□□□ -2
C9orf139Q6ZV77 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
C9orf139Q6ZV77 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
C9orf139Q6ZV77 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.57□□□□□ -2
C9orf139Q6ZV77 RNU6-78P-201ENST00000362897 107 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 RNA5SP383-201ENST00000362934 120 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 RNU5E-7P-201ENST00000365290 117 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 Y_RNA.459-201ENST00000384251 102 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 RNU6-1106P-201ENST00000390845 107 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 U3.37-201ENST00000408528 213 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.57□□□□□ -2
C9orf139Q6ZV77 RPL26P27-201ENST00000414397 437 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.57□□□□□ -2
C9orf139Q6ZV77 HMGN2P30-201ENST00000423237 256 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 TRIAP1P1-201ENST00000427062 225 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.57□□□□□ -2
C9orf139Q6ZV77 SNORA59A-201ENST00000459326 152 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 RPS29P27-201ENST00000463711 170 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 AC133134.1-201ENST00000466800 359 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 AK3P2-201ENST00000507976 429 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.57□□□□□ -2
C9orf139Q6ZV77 SNORA25.10-201ENST00000515926 124 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 RNU6-377P-201ENST00000515965 102 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.57□□□□□ -2
C9orf139Q6ZV77 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.57□□□□□ -2
C9orf139Q6ZV77 EIF4BP1-201ENST00000554881 351 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 LINC00933-203ENST00000559812 219 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.57□□□□□ -2
C9orf139Q6ZV77 AL158827.2-201ENST00000602494 330 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 AL133393.1-201ENST00000603277 287 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 AC018889.1-201ENST00000605372 397 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 AC004852.3-201ENST00000614131 326 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.57□□□□□ -2
C9orf139Q6ZV77 AL691447.3-201ENST00000635020 330 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 SRP72P2-201ENST00000344851 1979 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.57□□□□□ -2
C9orf139Q6ZV77 AC008669.1-201ENST00000565823 2178 ntBASIC2.57□□□□□ -2
C9orf139Q6ZV77 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
C9orf139Q6ZV77 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
C9orf139Q6ZV77 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.56□□□□□ -2
C9orf139Q6ZV77 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
C9orf139Q6ZV77 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
C9orf139Q6ZV77 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
C9orf139Q6ZV77 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
C9orf139Q6ZV77 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.56□□□□□ -2
C9orf139Q6ZV77 RNU6-942P-201ENST00000363002 107 ntBASIC2.56□□□□□ -2
C9orf139Q6ZV77 U3.6-201ENST00000363622 211 ntBASIC2.56□□□□□ -2
C9orf139Q6ZV77 Y_RNA.158-201ENST00000363651 101 ntBASIC2.56□□□□□ -2
C9orf139Q6ZV77 RNU6-336P-201ENST00000364891 107 ntBASIC2.56□□□□□ -2
C9orf139Q6ZV77 Y_RNA.364-201ENST00000365532 101 ntBASIC2.56□□□□□ -2
C9orf139Q6ZV77 Y_RNA.533-201ENST00000384596 114 ntBASIC2.56□□□□□ -2
C9orf139Q6ZV77 MIR521-1-201ENST00000384902 87 ntBASIC2.56□□□□□ -2
C9orf139Q6ZV77 RPS29P13-201ENST00000402041 169 ntBASIC2.56□□□□□ -2
C9orf139Q6ZV77 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.56□□□□□ -2
C9orf139Q6ZV77 AC099548.1-201ENST00000421443 426 ntBASIC2.56□□□□□ -2
C9orf139Q6ZV77 AL353997.1-201ENST00000432936 108 ntBASIC2.56□□□□□ -2
C9orf139Q6ZV77 CST9LP2-201ENST00000437612 320 ntBASIC2.56□□□□□ -2
C9orf139Q6ZV77 AP002884.2-201ENST00000471647 395 ntBASIC2.56□□□□□ -2
C9orf139Q6ZV77 AL049873.1-201ENST00000480540 376 ntBASIC2.56□□□□□ -2
C9orf139Q6ZV77 RPS27AP10-201ENST00000496103 208 ntBASIC2.56□□□□□ -2
C9orf139Q6ZV77 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms