Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC018868.1-201ENST00000491307 315 ntBASIC0.09□□□□□ -2.4
CSPG4Q6UVK1 TRBVA-201ENST00000498804 316 ntBASIC0.09□□□□□ -2.4
CSPG4Q6UVK1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.09□□□□□ -2.4
CSPG4Q6UVK1 NACAP3-201ENST00000552100 481 ntBASIC0.09□□□□□ -2.4
CSPG4Q6UVK1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.09□□□□□ -2.4
CSPG4Q6UVK1 AC106858.1-201ENST00000637497 429 ntBASIC0.09□□□□□ -2.4
CSPG4Q6UVK1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
CSPG4Q6UVK1 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 RPS26P42-201ENST00000413485 326 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AL161935.2-201ENST00000414627 60 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AC007435.1-201ENST00000421086 415 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AC092685.1-201ENST00000447960 1243 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 SNORD57-201ENST00000448188 72 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 PAXBP1P1-201ENST00000449315 447 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 RNA5SP290-201ENST00000517133 127 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 RNY1P9-201ENST00000532431 109 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AL121579.1-201ENST00000555129 305 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 SNORD39.3-201ENST00000584451 71 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AC073968.1-201ENST00000618594 637 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 MTND1P37-201ENST00000636562 264 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 U6.107-201ENST00000637108 79 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AC104651.1-201ENST00000427559 735 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 MTCO2P25-201ENST00000447065 681 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AL592447.1-201ENST00000447592 540 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 MTND3P4-201ENST00000453537 303 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AL441985.1-201ENST00000457727 251 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 RPL32P14-201ENST00000463196 378 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AL049830.1-201ENST00000468034 425 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 RPL26P26-201ENST00000480251 434 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AC011005.2-201ENST00000487324 359 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AC025465.3-201ENST00000510570 311 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 RNU4-54P-201ENST00000516428 129 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 HIGD1AP6-201ENST00000521833 279 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AC073410.2-201ENST00000603240 332 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 LARP7P1-201ENST00000605576 316 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 AC009509.4-201ENST00000619202 509 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 MTND4P16-201ENST00000466108 1367 ntBASIC0.08□□□□□ -2.4
CSPG4Q6UVK1 RNU6-349P-201ENST00000362402 107 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 RNU6-944P-201ENST00000364023 107 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 SNORD114-6-201ENST00000364393 72 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 RNU6-152P-201ENST00000384037 107 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 Y_RNA.514-201ENST00000384528 112 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 PNRC2P1-201ENST00000423940 420 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 AC092423.1-201ENST00000430165 186 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 AC074198.2-201ENST00000508153 258 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 RNA5SP503-201ENST00000517047 117 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 RNA5SP291-201ENST00000517222 105 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 IGKV1-22-201ENST00000524313 326 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 TRAV32-201ENST00000553993 340 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 AL353997.4-201ENST00000586196 166 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 NDUFA8P1-201ENST00000605525 367 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 AC004908.3-201ENST00000610248 625 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 RNU6-945P-201ENST00000383947 107 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 RNU6-348P-201ENST00000384386 107 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 snoU13.21-201ENST00000459368 105 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 RPS26P45-201ENST00000471748 340 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 RNU5B-3P-201ENST00000516601 115 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 AC069114.2-201ENST00000604699 304 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 AC112220.3-201ENST00000605502 502 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 AC098614.4-201ENST00000607601 462 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 AC017037.3-201ENST00000625016 472 ntBASIC0.07□□□□□ -2.4
CSPG4Q6UVK1 AC092447.10-201ENST00000620607 1652 ntBASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 SNORD114-16-201ENST00000363044 70 ntBASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 RNU6-439P-201ENST00000384188 106 ntBASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 SNORA32.3-201ENST00000384772 121 ntBASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 RPL21P111-201ENST00000418453 477 ntBASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 PTGES3P1-201ENST00000439531 483 ntBASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 AC245047.7-201ENST00000440265 293 ntBASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 RNU6-333P-201ENST00000459117 107 ntBASIC0.06□□□□□ -2.4
CSPG4Q6UVK1 AC010631.1-201ENST00000474150 156 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms