Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SUMO2P18-201ENST00000518873 252 ntBASIC4.21□□□□□ -1.74
RNF43Q68DV7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF43Q68DV7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF43Q68DV7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF43Q68DV7 MIR548X2-201ENST00000579776 100 ntBASIC4.21□□□□□ -1.74
RNF43Q68DV7 AC007179.3-201ENST00000604976 235 ntBASIC4.21□□□□□ -1.74
RNF43Q68DV7 AC019176.2-201ENST00000611579 315 ntBASIC4.21□□□□□ -1.74
RNF43Q68DV7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF43Q68DV7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.21□□□□□ -1.74
RNF43Q68DV7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF43Q68DV7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF43Q68DV7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNF43Q68DV7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF43Q68DV7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
RNF43Q68DV7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.2□□□□□ -1.74
RNF43Q68DV7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF43Q68DV7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
RNF43Q68DV7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF43Q68DV7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
RNF43Q68DV7 SNORA60-201ENST00000362396 134 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 RNU6-1298P-201ENST00000362456 101 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 RNA5SP119-201ENST00000362715 117 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 Y_RNA.230-201ENST00000364348 109 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 MIR491-201ENST00000384877 84 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 SNORA40C-201ENST00000391285 128 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 RNU2-52P-201ENST00000410680 190 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 RAB9AP3-201ENST00000412737 573 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 AL138785.1-201ENST00000425821 331 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF43Q68DV7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.2□□□□□ -1.74
RNF43Q68DV7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF43Q68DV7 AL590399.6-201ENST00000446396 307 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 RAB9AP1-201ENST00000449393 573 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 RPS27AP9-201ENST00000477681 438 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 AF186996.7-201ENST00000492781 209 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 RPL23AP49-201ENST00000492925 468 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 AC005840.1-201ENST00000498412 377 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 AC097462.2-201ENST00000504623 481 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 SNORA31.19-201ENST00000517079 126 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 AC112693.2-201ENST00000556538 232 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 AL391261.3-201ENST00000557194 520 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 MIR5695-201ENST00000579717 85 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.2□□□□□ -1.74
RNF43Q68DV7 U73479.1-201ENST00000618062 168 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF43Q68DV7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF43Q68DV7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF43Q68DV7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
RNF43Q68DV7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF43Q68DV7 AC116096.1-201ENST00000566804 2314 ntBASIC4.2□□□□□ -1.74
RNF43Q68DV7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RNF43Q68DV7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RNF43Q68DV7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
RNF43Q68DV7 Z82217.1-201ENST00000625157 8149 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 ZNF204P-201ENST00000416749 2397 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 RNU6-78P-201ENST00000362897 107 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 Y_RNA.182-201ENST00000363880 111 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 RNU6-1286P-201ENST00000383871 107 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 SNORD116-14-201ENST00000383894 92 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 SNORD116-17-201ENST00000383929 92 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 RNU6-281P-201ENST00000384212 103 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 RNU6-166P-201ENST00000384371 107 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 SNORD116-15-201ENST00000384445 92 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 SNORD116-20-201ENST00000384529 92 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 SNORD116-19-201ENST00000384729 92 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 MIR10B-201ENST00000385011 110 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 RNU6-1001P-201ENST00000411265 100 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 HSPE1P12-201ENST00000412576 301 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 AC007560.1-201ENST00000426912 237 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 MTND4LP9-201ENST00000427694 174 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.19□□□□□ -1.74
RNF43Q68DV7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.19□□□□□ -1.74
RNF43Q68DV7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF43Q68DV7 AC139453.3-201ENST00000493276 369 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 YWHAEP4-201ENST00000505390 198 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 SNORA74D-201ENST00000516404 141 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.19□□□□□ -1.74
RNF43Q68DV7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.19□□□□□ -1.74
RNF43Q68DV7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.19□□□□□ -1.74
RNF43Q68DV7 AC055872.1-201ENST00000570978 278 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 AC005255.1-201ENST00000593748 216 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 MIR6500-201ENST00000622700 86 ntBASIC4.19□□□□□ -1.74
RNF43Q68DV7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF43Q68DV7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
RNF43Q68DV7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF43Q68DV7 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
RNF43Q68DV7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF43Q68DV7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF43Q68DV7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RNF43Q68DV7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF43Q68DV7 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
RNF43Q68DV7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
RNF43Q68DV7 AC110774.1-201ENST00000623567 2018 ntBASIC4.18□□□□□ -1.74
RNF43Q68DV7 MAPK10-372ENST00000641954 3413 ntBASIC4.18□□□□□ -1.74
RNF43Q68DV7 RNA5SP124-201ENST00000362739 110 ntBASIC4.18□□□□□ -1.74
RNF43Q68DV7 Y_RNA.75-201ENST00000362927 97 ntBASIC4.18□□□□□ -1.74
RNF43Q68DV7 RNU6-541P-201ENST00000384709 110 ntBASIC4.18□□□□□ -1.74
RNF43Q68DV7 MIR329-1-201ENST00000385028 80 ntBASIC4.18□□□□□ -1.74
RNF43Q68DV7 MIR514A1-201ENST00000385133 98 ntBASIC4.18□□□□□ -1.74
RNF43Q68DV7 AL138878.1-201ENST00000405131 347 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms