Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VARS2Q5ST30 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.2□□□□□ -1.58
VARS2Q5ST30 RNU1-75P-201ENST00000347264 129 ntBASIC5.2□□□□□ -1.58
VARS2Q5ST30 U3.8-201ENST00000363675 217 ntBASIC5.2□□□□□ -1.58
VARS2Q5ST30 RNU6-219P-201ENST00000364728 107 ntBASIC5.2□□□□□ -1.58
VARS2Q5ST30 MT-TI-201ENST00000387365 69 ntBASIC5.2□□□□□ -1.58
VARS2Q5ST30 MIR759-201ENST00000390224 91 ntBASIC5.2□□□□□ -1.58
VARS2Q5ST30 RNU6-644P-201ENST00000391155 98 ntBASIC5.2□□□□□ -1.58
VARS2Q5ST30 FTH1P15-201ENST00000406984 280 ntBASIC5.2□□□□□ -1.58
VARS2Q5ST30 AC114755.2-201ENST00000413520 361 ntBASIC5.2□□□□□ -1.58
VARS2Q5ST30 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.2□□□□□ -1.58
VARS2Q5ST30 RN7SL604P-201ENST00000492589 296 ntBASIC5.2□□□□□ -1.58
VARS2Q5ST30 MIR3921-201ENST00000577308 85 ntBASIC5.2□□□□□ -1.58
VARS2Q5ST30 AC068724.3-201ENST00000625906 87 ntBASIC5.2□□□□□ -1.58
VARS2Q5ST30 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
VARS2Q5ST30 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VARS2Q5ST30 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.2□□□□□ -1.58
VARS2Q5ST30 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
VARS2Q5ST30 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
VARS2Q5ST30 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
VARS2Q5ST30 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.19□□□□□ -1.58
VARS2Q5ST30 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VARS2Q5ST30 U3.30-201ENST00000391308 210 ntBASIC5.19□□□□□ -1.58
VARS2Q5ST30 AC096949.1-201ENST00000412047 152 ntBASIC5.19□□□□□ -1.58
VARS2Q5ST30 AC004975.1-201ENST00000428733 208 ntBASIC5.19□□□□□ -1.58
VARS2Q5ST30 AL645939.1-201ENST00000453429 797 ntBASIC5.19□□□□□ -1.58
VARS2Q5ST30 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VARS2Q5ST30 AP001781.1-201ENST00000530977 207 ntBASIC5.19□□□□□ -1.58
VARS2Q5ST30 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.19□□□□□ -1.58
VARS2Q5ST30 MIR6134-201ENST00000617606 109 ntBASIC5.19□□□□□ -1.58
VARS2Q5ST30 AL022401.1-201ENST00000619498 108 ntBASIC5.19□□□□□ -1.58
VARS2Q5ST30 MIR6830-201ENST00000636015 70 ntBASIC5.19□□□□□ -1.58
VARS2Q5ST30 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VARS2Q5ST30 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.19□□□□□ -1.58
VARS2Q5ST30 NOL8P1-201ENST00000508336 3529 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 STX3-208ENST00000641815 3236 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VARS2Q5ST30 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
VARS2Q5ST30 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VARS2Q5ST30 Y_RNA.66-201ENST00000362862 102 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 RNU1-72P-201ENST00000362976 153 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 RNU1-64P-201ENST00000365443 163 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VARS2Q5ST30 MIR23B-201ENST00000384832 97 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 MIR548D2-201ENST00000384955 97 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 MIR873-201ENST00000401120 77 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 MIR298-201ENST00000401212 88 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 AC125238.1-201ENST00000448842 249 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 RPL39P25-201ENST00000449384 154 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 APOA2-205ENST00000468465 421 ntTSL 2 BASIC5.18□□□□□ -1.58
VARS2Q5ST30 RN7SL132P-201ENST00000478131 296 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC5.18□□□□□ -1.58
VARS2Q5ST30 RNY4P20-201ENST00000516678 93 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.18□□□□□ -1.58
VARS2Q5ST30 MIR3129-201ENST00000581095 76 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 AL591034.3-201ENST00000605511 685 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 FAM27B-201ENST00000610601 213 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 TCL6_2.1-201ENST00000615162 119 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 AC005562.2-201ENST00000618264 111 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 MIR6853-201ENST00000619642 74 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 SNORD98-201ENST00000636377 67 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VARS2Q5ST30 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VARS2Q5ST30 AC112198.2-201ENST00000426589 6996 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 AC118273.1-201ENST00000525324 3006 ntBASIC5.18□□□□□ -1.58
VARS2Q5ST30 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.18□□□□□ -1.58
VARS2Q5ST30 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.17□□□□□ -1.58
VARS2Q5ST30 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 RNU6-652P-201ENST00000365488 107 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 RNU6-1292P-201ENST00000383856 107 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 Y_RNA.565-201ENST00000384719 101 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 RN7SKP16-201ENST00000410180 299 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 PPIAP21-201ENST00000464473 501 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 RPL7AP28-201ENST00000464513 571 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 SNRPGP3-201ENST00000469405 227 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 SRIP1-201ENST00000489235 288 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 AC083906.5-201ENST00000503722 328 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 SCARNA22-201ENST00000503991 125 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 RNU6-126P-201ENST00000516685 103 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.17□□□□□ -1.58
VARS2Q5ST30 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.17□□□□□ -1.58
VARS2Q5ST30 AC027176.1-201ENST00000560204 514 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 MIR4277-201ENST00000578298 84 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 AC022726.1-201ENST00000587475 207 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 AL451007.1-201ENST00000595491 289 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 Six3os1_7.1-201ENST00000621512 201 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.17□□□□□ -1.58
VARS2Q5ST30 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.17□□□□□ -1.58
VARS2Q5ST30 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
VARS2Q5ST30 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.17□□□□□ -1.58
VARS2Q5ST30 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VARS2Q5ST30 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VARS2Q5ST30 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.17□□□□□ -1.58
VARS2Q5ST30 MUC2-202ENST00000613187 4845 ntBASIC5.17□□□□□ -1.58
VARS2Q5ST30 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VARS2Q5ST30 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
VARS2Q5ST30 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.16□□□□□ -1.58
VARS2Q5ST30 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
VARS2Q5ST30 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms