Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 SNORA48.2-201ENST00000390926 124 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 AC096664.2-201ENST00000411843 406 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC38Q502W7 SNAP23P1-201ENST00000433229 246 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 MTND4LP16-201ENST00000440828 295 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 RPL32P28-201ENST00000443577 397 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 EEF1B2P7-201ENST00000451177 676 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC38Q502W7 snoU13.14-201ENST00000459372 104 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 AC090525.1-201ENST00000479116 478 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 AC107953.1-201ENST00000522216 297 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 SCOCP1-201ENST00000554676 349 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC38Q502W7 MIR4801-201ENST00000582704 82 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 MIR3672-201ENST00000584290 82 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 MIR3942-201ENST00000585264 109 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 AC011712.1-201ENST00000588959 234 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 AC023043.2-201ENST00000589678 1026 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC38Q502W7 AL356157.2-201ENST00000605122 111 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 AL162274.2-201ENST00000614406 332 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 AL159153.1-201ENST00000619688 317 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 AC009248.2-201ENST00000619826 254 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 MTND4P23-201ENST00000447723 1363 ntBASIC2.99□□□□□ -1.93
CCDC38Q502W7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC38Q502W7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC38Q502W7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC38Q502W7 RNU1-35P-201ENST00000362782 153 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 RNU6-529P-201ENST00000363383 104 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 Y_RNA.135-201ENST00000363439 95 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 Y_RNA.212-201ENST00000364177 102 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 MT-TL1-201ENST00000386347 75 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 RNU6-876P-201ENST00000391295 104 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 HMGN2P35-201ENST00000412164 270 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 CYCSP48-201ENST00000417124 323 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC38Q502W7 AL645568.3-201ENST00000433683 316 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 AIG1P1-201ENST00000503376 148 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 MTCO2P30-201ENST00000503662 364 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 AC096745.1-201ENST00000509945 370 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 AC091826.1-201ENST00000514065 313 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 AC087241.2-201ENST00000535801 324 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC38Q502W7 AC107016.2-201ENST00000547968 190 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 TRAV32-201ENST00000553993 340 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC38Q502W7 AP001094.1-201ENST00000579805 193 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 AC090115.4-201ENST00000609970 188 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 MIR8057-201ENST00000620957 69 ntBASIC2.98□□□□□ -1.93
CCDC38Q502W7 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC38Q502W7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC38Q502W7 Y_RNA.160-201ENST00000363677 92 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 SNORA71.1-201ENST00000364523 117 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 MIR592-201ENST00000384959 97 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC38Q502W7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC38Q502W7 RPL35AP12-201ENST00000425362 338 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC38Q502W7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC38Q502W7 IFNA20P-201ENST00000436840 528 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC38Q502W7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC38Q502W7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC38Q502W7 AMD1P1-201ENST00000457220 922 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 RPL9P9-202ENST00000466501 579 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 RN7SL297P-201ENST00000483161 293 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 AC025465.4-201ENST00000513422 638 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 AL117351.2-201ENST00000513571 157 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 RNU4-49P-201ENST00000516080 140 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 RNU2-53P-201ENST00000516257 147 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 SNORA31.15-201ENST00000516771 132 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 HPRT1P3-201ENST00000539521 576 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 AC138761.3-201ENST00000579993 334 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 AC091135.1-201ENST00000585943 307 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 AL449363.1-201ENST00000617815 186 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 DUXAP9-208ENST00000622815 614 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 AC099654.14-201ENST00000638599 341 ntBASIC2.97□□□□□ -1.93
CCDC38Q502W7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC38Q502W7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
CCDC38Q502W7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CCDC38Q502W7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC38Q502W7 RNU6-212P-201ENST00000362642 104 ntBASIC2.96□□□□□ -1.94
CCDC38Q502W7 RNU6-562P-201ENST00000362731 107 ntBASIC2.96□□□□□ -1.94
CCDC38Q502W7 SNORD116-11-201ENST00000383882 92 ntBASIC2.96□□□□□ -1.94
CCDC38Q502W7 MIR634-201ENST00000385208 97 ntBASIC2.96□□□□□ -1.94
CCDC38Q502W7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC38Q502W7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC38Q502W7 AC008267.5-201ENST00000424928 265 ntBASIC2.96□□□□□ -1.94
CCDC38Q502W7 MTCO3P46-201ENST00000425787 232 ntBASIC2.96□□□□□ -1.94
CCDC38Q502W7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC38Q502W7 U8.21-201ENST00000459536 136 ntBASIC2.96□□□□□ -1.94
CCDC38Q502W7 RNU6-329P-201ENST00000459618 107 ntBASIC2.96□□□□□ -1.94
CCDC38Q502W7 AC073901.1-201ENST00000462471 408 ntBASIC2.96□□□□□ -1.94
CCDC38Q502W7 MTCO1P29-201ENST00000496868 288 ntBASIC2.96□□□□□ -1.94
CCDC38Q502W7 AC008526.1-201ENST00000509149 338 ntBASIC2.96□□□□□ -1.94
CCDC38Q502W7 AC115990.1-201ENST00000526957 301 ntBASIC2.96□□□□□ -1.94
CCDC38Q502W7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC38Q502W7 AP001836.1-201ENST00000604675 523 ntBASIC2.96□□□□□ -1.94
CCDC38Q502W7 AC104237.2-201ENST00000612456 443 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms