Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.55□□□□□ -1.84
ATP2B3Q16720 AC024153.1-201ENST00000603103 365 ntBASIC3.55□□□□□ -1.84
ATP2B3Q16720 AC008121.1-201ENST00000603244 268 ntBASIC3.55□□□□□ -1.84
ATP2B3Q16720 AL161629.2-201ENST00000615347 275 ntBASIC3.55□□□□□ -1.84
ATP2B3Q16720 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
ATP2B3Q16720 MTND5P10-201ENST00000603719 1809 ntBASIC3.55□□□□□ -1.84
ATP2B3Q16720 AL359693.1-201ENST00000614959 2407 ntBASIC3.55□□□□□ -1.84
ATP2B3Q16720 MTND5P30-201ENST00000452896 1731 ntBASIC3.55□□□□□ -1.84
ATP2B3Q16720 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ATP2B3Q16720 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ATP2B3Q16720 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
ATP2B3Q16720 RNU6-1115P-201ENST00000362490 106 ntBASIC3.54□□□□□ -1.84
ATP2B3Q16720 RNU6-884P-201ENST00000363889 107 ntBASIC3.54□□□□□ -1.84
ATP2B3Q16720 RNU6-1317P-201ENST00000364582 104 ntBASIC3.54□□□□□ -1.84
ATP2B3Q16720 Y_RNA.395-201ENST00000383945 109 ntBASIC3.54□□□□□ -1.84
ATP2B3Q16720 RNU6-1040P-201ENST00000383974 107 ntBASIC3.54□□□□□ -1.84
ATP2B3Q16720 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.54□□□□□ -1.84
ATP2B3Q16720 RPL21P40-201ENST00000428586 483 ntBASIC3.54□□□□□ -1.84
ATP2B3Q16720 AL645568.3-201ENST00000433683 316 ntBASIC3.54□□□□□ -1.84
ATP2B3Q16720 NDUFB1P2-201ENST00000449477 176 ntBASIC3.54□□□□□ -1.84
ATP2B3Q16720 NIPA2P5-201ENST00000452282 464 ntBASIC3.54□□□□□ -1.84
ATP2B3Q16720 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.54□□□□□ -1.84
ATP2B3Q16720 AC109446.1-201ENST00000566172 220 ntBASIC3.54□□□□□ -1.84
ATP2B3Q16720 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ATP2B3Q16720 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.54□□□□□ -1.84
ATP2B3Q16720 PART1_1.1-201ENST00000611761 217 ntBASIC3.54□□□□□ -1.84
ATP2B3Q16720 U2.21-201ENST00000637295 81 ntBASIC3.54□□□□□ -1.84
ATP2B3Q16720 AC110774.1-201ENST00000623567 2018 ntBASIC3.54□□□□□ -1.84
ATP2B3Q16720 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATP2B3Q16720 MTND4P1-201ENST00000457501 1466 ntBASIC3.54□□□□□ -1.84
ATP2B3Q16720 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ATP2B3Q16720 Y_RNA.5-201ENST00000362334 102 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 RNU6-898P-201ENST00000365627 104 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 U8.9-201ENST00000365667 134 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 RNU6-790P-201ENST00000384479 105 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 RNU6-692P-201ENST00000384496 107 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 BMS1P22-201ENST00000414726 313 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 AL096701.2-201ENST00000416920 238 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 AL160004.2-201ENST00000432935 350 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.53□□□□□ -1.84
ATP2B3Q16720 AL137792.2-201ENST00000443484 235 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 PCMTD1P1-201ENST00000455560 355 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.53□□□□□ -1.84
ATP2B3Q16720 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.53□□□□□ -1.84
ATP2B3Q16720 SNORA59A-201ENST00000459326 152 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 HMGN2P13-201ENST00000476476 274 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 FO393415.2-201ENST00000480085 343 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 AC090096.1-201ENST00000489168 390 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 AC006445.2-201ENST00000510061 472 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.53□□□□□ -1.84
ATP2B3Q16720 RNU6-1183P-201ENST00000517054 60 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATP2B3Q16720 SNRPGP18-201ENST00000553000 214 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 GTF3AP2-201ENST00000557014 266 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 AC078795.3-201ENST00000602913 472 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 AC009314.1-201ENST00000603871 304 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 AC016925.2-201ENST00000605108 242 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 AC090617.7-201ENST00000623952 126 ntBASIC3.53□□□□□ -1.84
ATP2B3Q16720 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.53□□□□□ -1.84
ATP2B3Q16720 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.53□□□□□ -1.84
ATP2B3Q16720 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATP2B3Q16720 RNU6-778P-201ENST00000363269 103 ntBASIC3.52□□□□□ -1.85
ATP2B3Q16720 SNORA5B-201ENST00000363786 132 ntBASIC3.52□□□□□ -1.85
ATP2B3Q16720 Y_RNA.510-201ENST00000384511 114 ntBASIC3.52□□□□□ -1.85
ATP2B3Q16720 MIR606-201ENST00000384851 96 ntBASIC3.52□□□□□ -1.85
ATP2B3Q16720 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.52□□□□□ -1.85
ATP2B3Q16720 AC243428.1-201ENST00000421099 264 ntBASIC3.52□□□□□ -1.85
ATP2B3Q16720 AL133396.1-201ENST00000432048 687 ntBASIC3.52□□□□□ -1.85
ATP2B3Q16720 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.52□□□□□ -1.85
ATP2B3Q16720 AC105272.1-201ENST00000438604 198 ntBASIC3.52□□□□□ -1.85
ATP2B3Q16720 SMURF2P1-201ENST00000514992 481 ntBASIC3.52□□□□□ -1.85
ATP2B3Q16720 RN7SKP132-201ENST00000516001 208 ntBASIC3.52□□□□□ -1.85
ATP2B3Q16720 SNORD59.2-201ENST00000516873 68 ntBASIC3.52□□□□□ -1.85
ATP2B3Q16720 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.52□□□□□ -1.85
ATP2B3Q16720 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.52□□□□□ -1.85
ATP2B3Q16720 MIR3609-201ENST00000582661 80 ntBASIC3.52□□□□□ -1.85
ATP2B3Q16720 AC011890.2-201ENST00000613393 294 ntBASIC3.52□□□□□ -1.85
ATP2B3Q16720 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATP2B3Q16720 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ATP2B3Q16720 AC233263.6-201ENST00000631132 1963 ntBASIC3.51□□□□□ -1.85
ATP2B3Q16720 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
ATP2B3Q16720 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
ATP2B3Q16720 SNORA33.2-201ENST00000365413 134 ntBASIC3.51□□□□□ -1.85
ATP2B3Q16720 SNORA75.6-201ENST00000391318 127 ntBASIC3.51□□□□□ -1.85
ATP2B3Q16720 RNU6-293P-201ENST00000411259 106 ntBASIC3.51□□□□□ -1.85
ATP2B3Q16720 AL117339.3-201ENST00000418733 162 ntBASIC3.51□□□□□ -1.85
ATP2B3Q16720 BX276092.3-201ENST00000424182 230 ntBASIC3.51□□□□□ -1.85
ATP2B3Q16720 RNU6-327P-201ENST00000516270 127 ntBASIC3.51□□□□□ -1.85
ATP2B3Q16720 RNU6-703P-201ENST00000516946 107 ntBASIC3.51□□□□□ -1.85
ATP2B3Q16720 MIR4782-201ENST00000577987 79 ntBASIC3.51□□□□□ -1.85
ATP2B3Q16720 ELOCP29-201ENST00000588193 334 ntBASIC3.51□□□□□ -1.85
ATP2B3Q16720 AC020895.1-201ENST00000595362 272 ntBASIC3.51□□□□□ -1.85
ATP2B3Q16720 HSPE1P7-201ENST00000604681 321 ntBASIC3.51□□□□□ -1.85
ATP2B3Q16720 AC007485.1-201ENST00000616755 206 ntBASIC3.51□□□□□ -1.85
ATP2B3Q16720 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATP2B3Q16720 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
ATP2B3Q16720 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATP2B3Q16720 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.5□□□□□ -1.85
ATP2B3Q16720 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ATP2B3Q16720 Y_RNA.148-201ENST00000363557 117 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms