Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.49□□□□□ -1.85
SF3B3Q15393 AL359273.1-201ENST00000510918 627 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.49□□□□□ -1.85
SF3B3Q15393 SCARNA16.2-201ENST00000516520 172 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 RN7SKP282-201ENST00000516824 299 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.49□□□□□ -1.85
SF3B3Q15393 TRAV37-201ENST00000553906 342 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.49□□□□□ -1.85
SF3B3Q15393 AC010653.1-201ENST00000571108 881 ntBASIC3.49□□□□□ -1.85
SF3B3Q15393 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.49□□□□□ -1.85
SF3B3Q15393 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SF3B3Q15393 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SF3B3Q15393 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.48□□□□□ -1.85
SF3B3Q15393 Y_RNA.33-201ENST00000362591 102 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 RNU6-1309P-201ENST00000363305 108 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 CD24P4-201ENST00000382840 243 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 MIR517A-201ENST00000385001 87 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.48□□□□□ -1.85
SF3B3Q15393 RPL23AP22-201ENST00000437556 453 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.48□□□□□ -1.85
SF3B3Q15393 IPO7P1-201ENST00000442031 636 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 RPS27P29-201ENST00000463110 252 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 AC011005.2-201ENST00000487324 359 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.48□□□□□ -1.85
SF3B3Q15393 AC006445.2-201ENST00000510061 472 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 SNORA25.10-201ENST00000515926 124 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 RNU6-1256P-201ENST00000516539 103 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 RNU6-699P-201ENST00000517081 110 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 RNA5SP380-201ENST00000517190 98 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.48□□□□□ -1.85
SF3B3Q15393 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.48□□□□□ -1.85
SF3B3Q15393 AC104576.1-201ENST00000524225 88 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.48□□□□□ -1.85
SF3B3Q15393 AL117187.1-201ENST00000555482 181 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.48□□□□□ -1.85
SF3B3Q15393 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.48□□□□□ -1.85
SF3B3Q15393 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.48□□□□□ -1.85
SF3B3Q15393 MIR3945-201ENST00000581853 98 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 OR1M4P-201ENST00000589199 287 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 BNIP3P16-201ENST00000589779 534 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 AC090132.2-201ENST00000615881 347 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 7SK.10-201ENST00000621414 298 ntBASIC3.48□□□□□ -1.85
SF3B3Q15393 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.48□□□□□ -1.85
SF3B3Q15393 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.48□□□□□ -1.85
SF3B3Q15393 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SF3B3Q15393 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
SF3B3Q15393 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
SF3B3Q15393 MIR34A-201ENST00000385130 110 ntBASIC3.47□□□□□ -1.85
SF3B3Q15393 MIR548F4-201ENST00000408515 105 ntBASIC3.47□□□□□ -1.85
SF3B3Q15393 Y_RNA.605-201ENST00000410577 105 ntBASIC3.47□□□□□ -1.85
SF3B3Q15393 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SF3B3Q15393 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.47□□□□□ -1.85
SF3B3Q15393 AC008267.5-201ENST00000424928 265 ntBASIC3.47□□□□□ -1.85
SF3B3Q15393 MYL8P-204ENST00000431574 518 ntBASIC3.47□□□□□ -1.85
SF3B3Q15393 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.47□□□□□ -1.85
SF3B3Q15393 FTH1P25-201ENST00000447665 469 ntBASIC3.47□□□□□ -1.85
SF3B3Q15393 AC125238.1-201ENST00000448842 249 ntBASIC3.47□□□□□ -1.85
SF3B3Q15393 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.47□□□□□ -1.85
SF3B3Q15393 AC022493.2-201ENST00000506122 481 ntBASIC3.47□□□□□ -1.85
SF3B3Q15393 RNU6-120P-201ENST00000516077 103 ntBASIC3.47□□□□□ -1.85
SF3B3Q15393 MIR892C-201ENST00000516410 77 ntBASIC3.47□□□□□ -1.85
SF3B3Q15393 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.47□□□□□ -1.85
SF3B3Q15393 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.47□□□□□ -1.85
SF3B3Q15393 AL132822.1-201ENST00000617063 513 ntBASIC3.47□□□□□ -1.85
SF3B3Q15393 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.47□□□□□ -1.85
SF3B3Q15393 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.47□□□□□ -1.85
SF3B3Q15393 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.47□□□□□ -1.85
SF3B3Q15393 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
SF3B3Q15393 CUL1P1-201ENST00000509510 2425 ntBASIC3.46□□□□□ -1.85
SF3B3Q15393 AC090740.1-201ENST00000623193 2262 ntBASIC3.46□□□□□ -1.85
SF3B3Q15393 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SF3B3Q15393 Y_RNA.2-201ENST00000362330 96 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 RNU1-35P-201ENST00000362782 153 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 Y_RNA.364-201ENST00000365532 101 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 SNORA41-201ENST00000384675 132 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 RNU6-1025P-201ENST00000410629 104 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.46□□□□□ -1.86
SF3B3Q15393 GSTA11P-201ENST00000452866 669 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.46□□□□□ -1.86
SF3B3Q15393 AL160314.1-201ENST00000490836 438 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.46□□□□□ -1.86
SF3B3Q15393 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.46□□□□□ -1.86
SF3B3Q15393 Y_RNA.661-201ENST00000516003 99 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 RN7SKP43-201ENST00000516173 320 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 SNORA70.16-201ENST00000516390 95 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 RNU6-307P-201ENST00000516743 106 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SF3B3Q15393 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.46□□□□□ -1.86
SF3B3Q15393 ATP5F1P5-201ENST00000526403 760 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.46□□□□□ -1.86
SF3B3Q15393 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.46□□□□□ -1.86
SF3B3Q15393 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.46□□□□□ -1.86
SF3B3Q15393 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.46□□□□□ -1.86
SF3B3Q15393 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.46□□□□□ -1.86
SF3B3Q15393 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.46□□□□□ -1.86
SF3B3Q15393 AC005899.2-201ENST00000584353 90 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 AC123912.5-201ENST00000605470 343 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 AC006157.1-201ENST00000611750 366 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 MIR6076-201ENST00000617521 113 ntBASIC3.46□□□□□ -1.86
SF3B3Q15393 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms