| NPRL3 | Q12980 | MIR518A2-201 | ENST00000384966 | 87 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | SNORA16.2-201 | ENST00000390991 | 127 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AL591416.1-201 | ENST00000404015 | 867 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | RNU2-48P-201 | ENST00000410694 | 191 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AL445989.1-202 | ENST00000418943 | 776 nt | TSL 2 BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AL356277.2-201 | ENST00000421318 | 441 nt | TSL 2 BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AL353193.1-201 | ENST00000421444 | 268 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AL355674.1-201 | ENST00000423681 | 648 nt | TSL 1 (best) BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AL451060.1-203 | ENST00000431307 | 362 nt | TSL 3 BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AL031659.1-201 | ENST00000447075 | 539 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | SPIN4-AS1-201 | ENST00000451979 | 426 nt | TSL 2 BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | SCARNA18-201 | ENST00000459004 | 134 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC026436.1-201 | ENST00000510537 | 270 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | RNU2-69P-201 | ENST00000516061 | 100 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | RNU6-405P-201 | ENST00000516637 | 110 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC109479.2-201 | ENST00000517842 | 174 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | MDM2-221 | ENST00000517852 | 393 nt | TSL 1 (best) BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC115990.1-201 | ENST00000526957 | 301 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | CYCSP27-201 | ENST00000527643 | 293 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC021269.2-201 | ENST00000532318 | 330 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC023050.3-201 | ENST00000541142 | 333 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC018630.3-201 | ENST00000542637 | 96 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | PSMA4-205 | ENST00000558281 | 773 nt | TSL 3 BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | MTCO3P23-201 | ENST00000561363 | 289 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC005154.1-222 | ENST00000579024 | 341 nt | TSL 5 BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | MTND1P15-201 | ENST00000579262 | 949 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | MIR4287-201 | ENST00000579398 | 78 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | MALAT1-207 | ENST00000613376 | 132 nt | TSL 3 BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC097372.5-201 | ENST00000623665 | 376 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AL160394.1-201 | ENST00000624765 | 724 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | LINC01002-202 | ENST00000631412 | 459 nt | TSL 5 BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC243829.7-201 | ENST00000633081 | 225 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | MDM2-206 | ENST00000350057 | 1401 nt | TSL 1 (best) BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | THOC2-216 | ENST00000491737 | 4452 nt | TSL 5 BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC008555.8-201 | ENST00000623602 | 2168 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | XRCC4-205 | ENST00000511817 | 1636 nt | APPRIS P4 TSL 1 (best) BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | MIER3-202 | ENST00000381199 | 5188 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | VPS54-202 | ENST00000354504 | 3594 nt | TSL 1 (best) BASIC | 2.13 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | C6orf10-201 | ENST00000375007 | 2125 nt | APPRIS ALT2 TSL 5 BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | CEP57L1-223 | ENST00000523787 | 2522 nt | APPRIS ALT2 TSL 5 BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | GSTA3-201 | ENST00000211122 | 902 nt | APPRIS P1 TSL 1 (best) BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | Y_RNA.1-201 | ENST00000352915 | 104 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | RNU6-552P-201 | ENST00000362869 | 119 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | RNU6-944P-201 | ENST00000364023 | 107 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | RNU6-517P-201 | ENST00000384362 | 110 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | RNU6-1158P-201 | ENST00000391167 | 107 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | U3.40-201 | ENST00000408706 | 208 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC004014.1-201 | ENST00000413406 | 538 nt | TSL 4 BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AL356379.1-201 | ENST00000414105 | 126 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AL590556.1-201 | ENST00000423231 | 483 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | WARS2P1-201 | ENST00000429678 | 537 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | LINC01650-201 | ENST00000438093 | 602 nt | TSL 2 BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | PRPS1P1-201 | ENST00000445305 | 876 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC245102.2-201 | ENST00000448956 | 180 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AL122001.1-201 | ENST00000457027 | 370 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | TH2LCRR-203 | ENST00000457489 | 439 nt | TSL 3 BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC027343.1-201 | ENST00000504765 | 407 nt | TSL 4 BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC097375.2-201 | ENST00000510416 | 579 nt | TSL 5 BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | LINC02545-201 | ENST00000525381 | 306 nt | TSL 3 BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC133480.1-201 | ENST00000547563 | 381 nt | TSL 3 BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC009063.1-201 | ENST00000563342 | 702 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AGGF1P4-201 | ENST00000568249 | 801 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC087683.1-201 | ENST00000591187 | 441 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC004908.3-201 | ENST00000610248 | 625 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | Z99129.1-201 | ENST00000612510 | 255 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | C8orf59-212 | ENST00000615697 | 483 nt | APPRIS P1 TSL 2 BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AL132822.1-201 | ENST00000617063 | 513 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AL162373.1-201 | ENST00000620433 | 407 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | SDR42E1P4-201 | ENST00000620894 | 481 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | USP53-202 | ENST00000450251 | 6072 nt | APPRIS P1 TSL 5 BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC069228.1-201 | ENST00000546936 | 1615 nt | TSL 3 BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | ZDBF2-202 | ENST00000611847 | 9890 nt | TSL 5 BASIC | 2.12 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | FGF7-206 | ENST00000614567 | 3936 nt | APPRIS P1 TSL 1 (best) BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | COMMD6-201 | ENST00000355801 | 486 nt | TSL 2 BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | RNU4-82P-201 | ENST00000362443 | 140 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | MIR29C-201 | ENST00000385231 | 88 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AL512604.1-201 | ENST00000404812 | 257 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC008440.2-201 | ENST00000413496 | 423 nt | TSL 5 BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | MTCYBP8-201 | ENST00000422855 | 651 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | USP9YP14-201 | ENST00000430663 | 563 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | RPS15AP10-201 | ENST00000432472 | 382 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | DNAJC19P4-201 | ENST00000440115 | 345 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC073415.1-201 | ENST00000449240 | 153 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | SNRPFP3-201 | ENST00000457792 | 225 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | RNU7-63P-201 | ENST00000459054 | 62 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC234781.5-201 | ENST00000508429 | 271 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | LINC02220-201 | ENST00000510065 | 270 nt | TSL 5 BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC010486.1-201 | ENST00000511793 | 424 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | RNA5SP24-201 | ENST00000516478 | 95 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AL358937.1-201 | ENST00000524512 | 336 nt | TSL 2 BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AL137161.1-201 | ENST00000532231 | 390 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC091805.2-201 | ENST00000603848 | 235 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC017083.3-201 | ENST00000609955 | 700 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | AC048344.4-201 | ENST00000619744 | 527 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | ZEB2_AS1_1.1-201 | ENST00000621504 | 128 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | CSNK1G3-202 | ENST00000360683 | 4047 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.11 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | ATP8A2P2-201 | ENST00000437678 | 1568 nt | BASIC | 2.1 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | CFHR4-202 | ENST00000367416 | 2178 nt | APPRIS P1 TSL 2 BASIC | 2.1 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | LRRCC1-202 | ENST00000414626 | 4493 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.1 | □□□□□ -2.07 | | |
| NPRL3 | Q12980 | PTPRQ-209 | ENST00000616559 | 8165 nt | TSL 5 BASIC | 2.1 | □□□□□ -2.07 | | |