Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 RPS3AP17-201ENST00000472594 777 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 RN7SKP219-201ENST00000516825 296 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 RNU6-667P-201ENST00000517186 102 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 AP003392.2-201ENST00000527269 208 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 AP000763.2-201ENST00000540641 163 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 SNRPGP18-201ENST00000553000 214 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.84□□□□□ -2.11
RAB40BQ12829 MTATP6P3-201ENST00000581686 676 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 RSL24D1P11-201ENST00000591045 491 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.84□□□□□ -2.11
RAB40BQ12829 AC078795.2-201ENST00000602835 1252 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 AC123912.5-201ENST00000605470 343 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 Z82243.1-201ENST00000609432 473 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 AL159153.1-201ENST00000619688 317 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.84□□□□□ -2.11
RAB40BQ12829 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RAB40BQ12829 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.84□□□□□ -2.11
RAB40BQ12829 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
RAB40BQ12829 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
RAB40BQ12829 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
RAB40BQ12829 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.83□□□□□ -2.12
RAB40BQ12829 Y_RNA.359-201ENST00000365498 102 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 RNU6-517P-201ENST00000384362 110 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 MIR29B2-201ENST00000385055 81 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 RNU6-903P-201ENST00000391270 109 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 AC068050.1-201ENST00000394891 380 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 RNU2-32P-201ENST00000411193 191 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 SNORD56-201ENST00000413522 71 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.83□□□□□ -2.12
RAB40BQ12829 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RAB40BQ12829 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.83□□□□□ -2.12
RAB40BQ12829 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.83□□□□□ -2.12
RAB40BQ12829 AL122001.1-201ENST00000457027 370 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 AC055731.1-201ENST00000474387 401 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 RPL30P1-201ENST00000488676 339 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.83□□□□□ -2.12
RAB40BQ12829 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 MTND2P33-201ENST00000506452 1031 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.83□□□□□ -2.12
RAB40BQ12829 RPL23AP94-201ENST00000512518 302 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 RN7SKP256-201ENST00000517201 314 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 AC109479.2-201ENST00000517842 174 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 MTND2P38-201ENST00000522536 667 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RAB40BQ12829 NDUFA5P6-201ENST00000542110 379 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.83□□□□□ -2.12
RAB40BQ12829 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.83□□□□□ -2.12
RAB40BQ12829 AC026271.5-201ENST00000577873 130 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 MIR4529-201ENST00000578110 78 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 MIR4448-201ENST00000584360 86 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 AC007229.1-201ENST00000590455 412 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 APOOP1-201ENST00000604695 592 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 AC002044.1-201ENST00000606707 158 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 uc_338.20-201ENST00000621563 178 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 AC005609.4-201ENST00000625071 447 ntBASIC1.83□□□□□ -2.12
RAB40BQ12829 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.83□□□□□ -2.12
RAB40BQ12829 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
RAB40BQ12829 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.83□□□□□ -2.12
RAB40BQ12829 AP006437.1-201ENST00000641440 3685 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
RAB40BQ12829 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
RAB40BQ12829 Y_RNA.296-201ENST00000364930 108 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 RNU6-546P-201ENST00000383991 107 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 RNU6-1222P-201ENST00000384615 107 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 HMGN2P39-201ENST00000398005 273 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 GSTA9P-201ENST00000406231 611 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 CDK8P2-201ENST00000415020 547 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 MTCYBP8-201ENST00000422855 651 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.82□□□□□ -2.12
RAB40BQ12829 AC002486.1-201ENST00000435098 391 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.82□□□□□ -2.12
RAB40BQ12829 AL360221.1-201ENST00000445989 335 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 AC079140.5-201ENST00000507882 310 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 AC079140.3-201ENST00000511111 550 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 RNU2-19P-201ENST00000517288 84 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.82□□□□□ -2.12
RAB40BQ12829 AL137161.1-201ENST00000532231 390 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.82□□□□□ -2.12
RAB40BQ12829 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.82□□□□□ -2.12
RAB40BQ12829 ANP32BP3-201ENST00000559213 706 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 AC009063.1-201ENST00000563342 702 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 AC010620.1-201ENST00000601088 1102 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 AC091805.2-201ENST00000603848 235 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 AL391646.1-201ENST00000603860 190 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 RN7SKP299-201ENST00000606679 301 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 AP001596.2-201ENST00000608410 312 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 AC007684.1-201ENST00000609671 477 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 AC004908.3-201ENST00000610248 625 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 AL590808.1-201ENST00000618696 141 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 AC098657.3-201ENST00000620434 263 ntBASIC1.82□□□□□ -2.12
RAB40BQ12829 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.82□□□□□ -2.12
RAB40BQ12829 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.82□□□□□ -2.12
RAB40BQ12829 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RAB40BQ12829 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
RAB40BQ12829 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.81□□□□□ -2.12
RAB40BQ12829 RNU6-944P-201ENST00000364023 107 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 RNU6-266P-201ENST00000364225 107 ntBASIC1.81□□□□□ -2.12
RAB40BQ12829 RNU6-1103P-201ENST00000384150 107 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms