Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.28□□□□□ -2.37
HMGXB3Q12766 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.28□□□□□ -2.37
HMGXB3Q12766 MTCYBP43-201ENST00000513621 740 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 SNORA70.22-201ENST00000517160 124 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.28□□□□□ -2.37
HMGXB3Q12766 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
HMGXB3Q12766 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.28□□□□□ -2.37
HMGXB3Q12766 MIR4768-201ENST00000585270 74 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 AC112220.2-201ENST00000605513 533 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 AL158211.4-201ENST00000606988 584 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 AC004908.3-201ENST00000610248 625 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 MIR198-201ENST00000637333 62 ntBASIC0.28□□□□□ -2.37
HMGXB3Q12766 RNU6-819P-201ENST00000364116 107 ntBASIC0.27□□□□□ -2.37
HMGXB3Q12766 RNU6-1280P-201ENST00000365211 107 ntBASIC0.27□□□□□ -2.37
HMGXB3Q12766 RNU6-110P-201ENST00000384508 104 ntBASIC0.27□□□□□ -2.37
HMGXB3Q12766 AC092634.6-201ENST00000418558 192 ntBASIC0.27□□□□□ -2.37
HMGXB3Q12766 AL589872.1-201ENST00000426602 288 ntBASIC0.27□□□□□ -2.37
HMGXB3Q12766 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
HMGXB3Q12766 RNA5SP269-201ENST00000459032 137 ntBASIC0.27□□□□□ -2.37
HMGXB3Q12766 RPL30P1-201ENST00000488676 339 ntBASIC0.27□□□□□ -2.37
HMGXB3Q12766 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.27□□□□□ -2.37
HMGXB3Q12766 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.27□□□□□ -2.37
HMGXB3Q12766 AC093027.1-201ENST00000546698 429 ntBASIC0.27□□□□□ -2.37
HMGXB3Q12766 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.27□□□□□ -2.37
HMGXB3Q12766 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.27□□□□□ -2.37
HMGXB3Q12766 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.27□□□□□ -2.37
HMGXB3Q12766 AC034229.4-201ENST00000607861 441 ntBASIC0.27□□□□□ -2.37
HMGXB3Q12766 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.27□□□□□ -2.37
HMGXB3Q12766 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.27□□□□□ -2.37
HMGXB3Q12766 AC097372.5-201ENST00000623665 376 ntBASIC0.27□□□□□ -2.37
HMGXB3Q12766 AC245060.5-201ENST00000610778 3293 ntBASIC0.26□□□□□ -2.37
HMGXB3Q12766 SNORD3E-201ENST00000362899 217 ntBASIC0.26□□□□□ -2.37
HMGXB3Q12766 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
HMGXB3Q12766 AL592310.1-201ENST00000414330 671 ntBASIC0.26□□□□□ -2.37
HMGXB3Q12766 AC114482.1-201ENST00000418010 247 ntBASIC0.26□□□□□ -2.37
HMGXB3Q12766 GTF2IP13-201ENST00000438487 386 ntBASIC0.26□□□□□ -2.37
HMGXB3Q12766 AC092001.1-201ENST00000453012 261 ntBASIC0.26□□□□□ -2.37
HMGXB3Q12766 COX6CP6-201ENST00000490840 228 ntBASIC0.26□□□□□ -2.37
HMGXB3Q12766 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.26□□□□□ -2.37
HMGXB3Q12766 MTCO1P31-201ENST00000506355 492 ntBASIC0.26□□□□□ -2.37
HMGXB3Q12766 IGJP1-201ENST00000522682 475 ntBASIC0.26□□□□□ -2.37
HMGXB3Q12766 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.26□□□□□ -2.37
HMGXB3Q12766 AP003392.2-201ENST00000527269 208 ntBASIC0.26□□□□□ -2.37
HMGXB3Q12766 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC0.26□□□□□ -2.37
HMGXB3Q12766 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.26□□□□□ -2.37
HMGXB3Q12766 AC095057.3-201ENST00000567102 1157 ntBASIC0.26□□□□□ -2.37
HMGXB3Q12766 AP003465.2-201ENST00000602571 373 ntBASIC0.26□□□□□ -2.37
HMGXB3Q12766 AC011451.2-201ENST00000604303 598 ntBASIC0.26□□□□□ -2.37
HMGXB3Q12766 AC004853.1-201ENST00000604902 698 ntBASIC0.26□□□□□ -2.37
HMGXB3Q12766 AL133445.2-201ENST00000611191 527 ntBASIC0.26□□□□□ -2.37
HMGXB3Q12766 AC130454.1-201ENST00000622948 401 ntBASIC0.26□□□□□ -2.37
HMGXB3Q12766 SNORD114-19-201ENST00000363072 75 ntBASIC0.25□□□□□ -2.37
HMGXB3Q12766 Y_RNA.100-201ENST00000363141 102 ntBASIC0.25□□□□□ -2.37
HMGXB3Q12766 RNA5SP493-201ENST00000364115 91 ntBASIC0.25□□□□□ -2.37
HMGXB3Q12766 RNU6-160P-201ENST00000384591 107 ntBASIC0.25□□□□□ -2.37
HMGXB3Q12766 TMSB4XP8-201ENST00000402089 135 ntBASIC0.25□□□□□ -2.37
HMGXB3Q12766 RNA5SP118-201ENST00000410385 109 ntBASIC0.25□□□□□ -2.37
HMGXB3Q12766 TMSB4XP6-201ENST00000415187 135 ntBASIC0.25□□□□□ -2.37
HMGXB3Q12766 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.25□□□□□ -2.37
HMGXB3Q12766 TMSB4XP1-201ENST00000424567 135 ntBASIC0.25□□□□□ -2.37
HMGXB3Q12766 HMGN2P22-201ENST00000427588 175 ntBASIC0.25□□□□□ -2.37
HMGXB3Q12766 MTND1P28-201ENST00000435623 950 ntBASIC0.25□□□□□ -2.37
HMGXB3Q12766 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.25□□□□□ -2.37
HMGXB3Q12766 RNU6-416P-201ENST00000516265 103 ntBASIC0.25□□□□□ -2.37
HMGXB3Q12766 RNU6-528P-201ENST00000516926 100 ntBASIC0.25□□□□□ -2.37
HMGXB3Q12766 RNU6-703P-201ENST00000516946 107 ntBASIC0.25□□□□□ -2.37
HMGXB3Q12766 RNU6-1092P-201ENST00000516955 87 ntBASIC0.25□□□□□ -2.37
HMGXB3Q12766 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.25□□□□□ -2.37
HMGXB3Q12766 AC018659.1-201ENST00000551083 169 ntBASIC0.25□□□□□ -2.37
HMGXB3Q12766 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.25□□□□□ -2.37
HMGXB3Q12766 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.25□□□□□ -2.37
HMGXB3Q12766 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.25□□□□□ -2.37
HMGXB3Q12766 AC068790.6-201ENST00000602558 258 ntBASIC0.25□□□□□ -2.37
HMGXB3Q12766 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.25□□□□□ -2.37
HMGXB3Q12766 AC004009.2-201ENST00000623016 728 ntBASIC0.25□□□□□ -2.37
HMGXB3Q12766 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
HMGXB3Q12766 AL133475.1-201ENST00000404414 305 ntBASIC0.24□□□□□ -2.37
HMGXB3Q12766 MIR1207-201ENST00000408249 87 ntBASIC0.24□□□□□ -2.37
HMGXB3Q12766 RNU2-7P-201ENST00000410794 178 ntBASIC0.24□□□□□ -2.37
HMGXB3Q12766 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.24□□□□□ -2.37
HMGXB3Q12766 AL096829.2-201ENST00000446582 742 ntBASIC0.24□□□□□ -2.37
HMGXB3Q12766 ACA59.2-201ENST00000517061 156 ntBASIC0.24□□□□□ -2.37
HMGXB3Q12766 AC090578.1-201ENST00000604955 591 ntBASIC0.24□□□□□ -2.37
HMGXB3Q12766 AC104465.1-201ENST00000611365 139 ntBASIC0.24□□□□□ -2.37
HMGXB3Q12766 AC010133.1-201ENST00000615809 842 ntBASIC0.24□□□□□ -2.37
HMGXB3Q12766 SNORD115-41-201ENST00000363608 82 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 C8orf59P1-201ENST00000429930 303 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 MTND2P5-201ENST00000432656 1006 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 TIMM9P1-201ENST00000436122 256 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 MTND2P21-201ENST00000436242 1042 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.23□□□□□ -2.37
HMGXB3Q12766 RNA5SP503-201ENST00000517047 117 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 AP001893.2-201ENST00000526949 202 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.23□□□□□ -2.37
HMGXB3Q12766 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 Z83818.1-201ENST00000603584 150 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 AC068205.3-201ENST00000636385 468 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.23□□□□□ -2.37
HMGXB3Q12766 RNA5SP361-201ENST00000362686 118 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms