Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 MIR6759-201ENST00000638110 65 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
CPSF1Q10570 Y_RNA.548-201ENST00000384656 105 ntBASIC0.29□□□□□ -2.36
CPSF1Q10570 RNU6-754P-201ENST00000391166 107 ntBASIC0.29□□□□□ -2.36
CPSF1Q10570 AL133264.1-201ENST00000407157 562 ntBASIC0.29□□□□□ -2.36
CPSF1Q10570 AC138623.1-201ENST00000418060 216 ntBASIC0.29□□□□□ -2.36
CPSF1Q10570 MTCO3P1-205ENST00000422088 832 ntBASIC0.29□□□□□ -2.36
CPSF1Q10570 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.29□□□□□ -2.36
CPSF1Q10570 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.29□□□□□ -2.36
CPSF1Q10570 AL353997.4-201ENST00000586196 166 ntBASIC0.29□□□□□ -2.36
CPSF1Q10570 AL161798.1-201ENST00000604630 131 ntBASIC0.29□□□□□ -2.36
CPSF1Q10570 AC105129.3-201ENST00000605455 485 ntBASIC0.29□□□□□ -2.36
CPSF1Q10570 AC104465.1-201ENST00000611365 139 ntBASIC0.29□□□□□ -2.36
CPSF1Q10570 uc_338.15-201ENST00000615470 191 ntBASIC0.29□□□□□ -2.36
CPSF1Q10570 AC018926.1-201ENST00000616335 435 ntBASIC0.29□□□□□ -2.36
CPSF1Q10570 AL590240.4-201ENST00000616908 390 ntBASIC0.29□□□□□ -2.36
CPSF1Q10570 AC123767.1-202ENST00000620407 817 ntBASIC0.29□□□□□ -2.36
CPSF1Q10570 AC093648.1-201ENST00000623546 606 ntBASIC0.29□□□□□ -2.36
CPSF1Q10570 U6.99-201ENST00000637524 83 ntBASIC0.29□□□□□ -2.36
CPSF1Q10570 AC245060.5-201ENST00000610778 3293 ntBASIC0.28□□□□□ -2.36
CPSF1Q10570 RNU6-529P-201ENST00000363383 104 ntBASIC0.28□□□□□ -2.37
CPSF1Q10570 SNORD18A-201ENST00000363753 72 ntBASIC0.28□□□□□ -2.37
CPSF1Q10570 RNU6-944P-201ENST00000364023 107 ntBASIC0.28□□□□□ -2.37
CPSF1Q10570 RNU6-1005P-201ENST00000384519 107 ntBASIC0.28□□□□□ -2.37
CPSF1Q10570 MIR32-201ENST00000384965 70 ntBASIC0.28□□□□□ -2.37
CPSF1Q10570 MIR605-201ENST00000385078 83 ntBASIC0.28□□□□□ -2.37
CPSF1Q10570 AL669831.1-202ENST00000428504 417 ntBASIC0.28□□□□□ -2.37
CPSF1Q10570 USP9YP22-201ENST00000438971 294 ntBASIC0.28□□□□□ -2.37
CPSF1Q10570 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.28□□□□□ -2.37
CPSF1Q10570 OFD1P3Y-201ENST00000453312 783 ntBASIC0.28□□□□□ -2.37
CPSF1Q10570 FABP5P15-201ENST00000453566 214 ntBASIC0.28□□□□□ -2.37
CPSF1Q10570 RNU6-760P-201ENST00000516078 97 ntBASIC0.28□□□□□ -2.37
CPSF1Q10570 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.28□□□□□ -2.37
CPSF1Q10570 HMGB1P33-201ENST00000563485 527 ntBASIC0.28□□□□□ -2.37
CPSF1Q10570 AC090578.1-201ENST00000604955 591 ntBASIC0.28□□□□□ -2.37
CPSF1Q10570 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.28□□□□□ -2.37
CPSF1Q10570 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.28□□□□□ -2.37
CPSF1Q10570 AC068647.2-201ENST00000637380 353 ntBASIC0.28□□□□□ -2.37
CPSF1Q10570 MIR6086-201ENST00000638065 55 ntBASIC0.28□□□□□ -2.37
CPSF1Q10570 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CPSF1Q10570 RNU6-1010P-201ENST00000362757 107 ntBASIC0.27□□□□□ -2.37
CPSF1Q10570 Y_RNA.274-201ENST00000364714 101 ntBASIC0.27□□□□□ -2.37
CPSF1Q10570 MIR520A-201ENST00000384862 85 ntBASIC0.27□□□□□ -2.37
CPSF1Q10570 MIR200A-201ENST00000384875 90 ntBASIC0.27□□□□□ -2.37
CPSF1Q10570 MIR186-201ENST00000384988 86 ntBASIC0.27□□□□□ -2.37
CPSF1Q10570 RNU2-7P-201ENST00000410794 178 ntBASIC0.27□□□□□ -2.37
CPSF1Q10570 RPS3AP1-201ENST00000413190 320 ntBASIC0.27□□□□□ -2.37
CPSF1Q10570 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.27□□□□□ -2.37
CPSF1Q10570 ISCA1P1-201ENST00000426679 387 ntBASIC0.27□□□□□ -2.37
CPSF1Q10570 AC023194.1-201ENST00000493084 308 ntBASIC0.27□□□□□ -2.37
CPSF1Q10570 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.27□□□□□ -2.37
CPSF1Q10570 AC118282.2-201ENST00000508739 374 ntBASIC0.27□□□□□ -2.37
CPSF1Q10570 AC074344.1-201ENST00000512823 224 ntBASIC0.27□□□□□ -2.37
CPSF1Q10570 RN7SKP256-201ENST00000517201 314 ntBASIC0.27□□□□□ -2.37
CPSF1Q10570 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.27□□□□□ -2.37
CPSF1Q10570 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.27□□□□□ -2.37
CPSF1Q10570 AC025423.5-201ENST00000550230 219 ntBASIC0.27□□□□□ -2.37
CPSF1Q10570 AC018659.1-201ENST00000551083 169 ntBASIC0.27□□□□□ -2.37
CPSF1Q10570 AC091946.2-201ENST00000606105 291 ntBASIC0.27□□□□□ -2.37
CPSF1Q10570 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
CPSF1Q10570 AL138726.1-201ENST00000614873 333 ntBASIC0.27□□□□□ -2.37
CPSF1Q10570 MIR6516-201ENST00000630554 81 ntBASIC0.27□□□□□ -2.37
CPSF1Q10570 MIR329-2-201ENST00000385029 84 ntBASIC0.26□□□□□ -2.37
CPSF1Q10570 DHFRP6-201ENST00000401776 268 ntBASIC0.26□□□□□ -2.37
CPSF1Q10570 MTCO2P31-201ENST00000402702 684 ntBASIC0.26□□□□□ -2.37
CPSF1Q10570 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
CPSF1Q10570 CETN4P-201ENST00000432407 469 ntBASIC0.26□□□□□ -2.37
CPSF1Q10570 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.26□□□□□ -2.37
CPSF1Q10570 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.26□□□□□ -2.37
CPSF1Q10570 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.26□□□□□ -2.37
CPSF1Q10570 AC026410.2-201ENST00000460281 156 ntBASIC0.26□□□□□ -2.37
CPSF1Q10570 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
CPSF1Q10570 RNA5SP168-201ENST00000516642 112 ntBASIC0.26□□□□□ -2.37
CPSF1Q10570 AP001893.2-201ENST00000526949 202 ntBASIC0.26□□□□□ -2.37
CPSF1Q10570 AC068790.6-201ENST00000602558 258 ntBASIC0.26□□□□□ -2.37
CPSF1Q10570 AL163051.2-201ENST00000618976 735 ntBASIC0.26□□□□□ -2.37
CPSF1Q10570 AC013470.4-201ENST00000619978 986 ntBASIC0.26□□□□□ -2.37
CPSF1Q10570 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
CPSF1Q10570 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.25□□□□□ -2.37
CPSF1Q10570 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
CPSF1Q10570 MIR194-1-201ENST00000384892 85 ntBASIC0.25□□□□□ -2.37
CPSF1Q10570 RNU6-1300P-201ENST00000391046 108 ntBASIC0.25□□□□□ -2.37
CPSF1Q10570 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.25□□□□□ -2.37
CPSF1Q10570 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.25□□□□□ -2.37
CPSF1Q10570 RNU5A-4P-201ENST00000516588 111 ntBASIC0.25□□□□□ -2.37
CPSF1Q10570 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.25□□□□□ -2.37
CPSF1Q10570 AL356057.1-201ENST00000533798 831 ntBASIC0.25□□□□□ -2.37
CPSF1Q10570 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CPSF1Q10570 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.25□□□□□ -2.37
CPSF1Q10570 MIR5190-201ENST00000581537 80 ntBASIC0.25□□□□□ -2.37
CPSF1Q10570 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
CPSF1Q10570 AC146944.4-201ENST00000602697 718 ntBASIC0.25□□□□□ -2.37
CPSF1Q10570 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
CPSF1Q10570 Y_RNA.476-201ENST00000384347 108 ntBASIC0.24□□□□□ -2.37
CPSF1Q10570 MIR548B-201ENST00000385247 97 ntBASIC0.24□□□□□ -2.37
CPSF1Q10570 MTCO2P5-201ENST00000422621 426 ntBASIC0.24□□□□□ -2.37
CPSF1Q10570 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.24□□□□□ -2.37
CPSF1Q10570 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.24□□□□□ -2.37
CPSF1Q10570 GTF2IP3-201ENST00000433887 494 ntBASIC0.24□□□□□ -2.37
CPSF1Q10570 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms