Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL031659.1-201ENST00000447075 539 ntBASIC2.2□□□□□ -2.06
SCN1BQ07699 AC083798.1-201ENST00000472671 131 ntBASIC2.2□□□□□ -2.06
SCN1BQ07699 AC093534.1-201ENST00000504977 132 ntBASIC2.2□□□□□ -2.06
SCN1BQ07699 AC009646.1-201ENST00000510455 318 ntBASIC2.2□□□□□ -2.06
SCN1BQ07699 RNA5SP282-201ENST00000516355 108 ntBASIC2.2□□□□□ -2.06
SCN1BQ07699 RNU6-1038P-201ENST00000516516 104 ntBASIC2.2□□□□□ -2.06
SCN1BQ07699 AC104383.1-201ENST00000530297 370 ntBASIC2.2□□□□□ -2.06
SCN1BQ07699 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.2□□□□□ -2.06
SCN1BQ07699 AC018630.3-201ENST00000542637 96 ntBASIC2.2□□□□□ -2.06
SCN1BQ07699 OR11H5P-201ENST00000554039 926 ntBASIC2.2□□□□□ -2.06
SCN1BQ07699 AC103987.3-201ENST00000582071 292 ntBASIC2.2□□□□□ -2.06
SCN1BQ07699 BNIP3P22-201ENST00000593399 556 ntBASIC2.2□□□□□ -2.06
SCN1BQ07699 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.2□□□□□ -2.06
SCN1BQ07699 AC048344.4-201ENST00000619744 527 ntBASIC2.2□□□□□ -2.06
SCN1BQ07699 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.2□□□□□ -2.06
SCN1BQ07699 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.2□□□□□ -2.06
SCN1BQ07699 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.2□□□□□ -2.06
SCN1BQ07699 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
SCN1BQ07699 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
SCN1BQ07699 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SCN1BQ07699 SNORD62.1-201ENST00000362541 86 ntBASIC2.19□□□□□ -2.06
SCN1BQ07699 RNU6-1141P-201ENST00000364520 107 ntBASIC2.19□□□□□ -2.06
SCN1BQ07699 OR5H15-201ENST00000383696 930 ntBASIC2.19□□□□□ -2.06
SCN1BQ07699 RNU6-611P-201ENST00000384276 104 ntBASIC2.19□□□□□ -2.06
SCN1BQ07699 MIR518A2-201ENST00000384966 87 ntBASIC2.19□□□□□ -2.06
SCN1BQ07699 SNORD73A-201ENST00000386062 65 ntBASIC2.19□□□□□ -2.06
SCN1BQ07699 SNAP23P1-201ENST00000433229 246 ntBASIC2.19□□□□□ -2.06
SCN1BQ07699 IFNA20P-201ENST00000436840 528 ntBASIC2.19□□□□□ -2.06
SCN1BQ07699 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.19□□□□□ -2.06
SCN1BQ07699 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.19□□□□□ -2.06
SCN1BQ07699 MTATP6P26-201ENST00000445926 662 ntBASIC2.19□□□□□ -2.06
SCN1BQ07699 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.19□□□□□ -2.06
SCN1BQ07699 PRELID3BP1-201ENST00000457142 540 ntBASIC2.19□□□□□ -2.06
SCN1BQ07699 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.19□□□□□ -2.06
SCN1BQ07699 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.19□□□□□ -2.06
SCN1BQ07699 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.19□□□□□ -2.06
SCN1BQ07699 MTND3P5-201ENST00000512798 333 ntBASIC2.19□□□□□ -2.06
SCN1BQ07699 AC096725.1-201ENST00000514266 313 ntBASIC2.19□□□□□ -2.06
SCN1BQ07699 RNU4-29P-201ENST00000515943 174 ntBASIC2.19□□□□□ -2.06
SCN1BQ07699 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SCN1BQ07699 VN1R107P-201ENST00000601784 209 ntBASIC2.19□□□□□ -2.06
SCN1BQ07699 AC007621.1-201ENST00000604544 437 ntBASIC2.19□□□□□ -2.06
SCN1BQ07699 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SCN1BQ07699 AC069528.2-201ENST00000624849 1991 ntBASIC2.19□□□□□ -2.06
SCN1BQ07699 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SCN1BQ07699 RNU6-1322P-201ENST00000364309 107 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 SNORA70.4-201ENST00000365509 134 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 SNORA69-201ENST00000383895 132 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 Y_RNA.559-201ENST00000384686 107 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 BTF3L4P2-201ENST00000392798 346 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 MIR1262-201ENST00000408276 93 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 RNU2-16P-201ENST00000410712 136 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.18□□□□□ -2.06
SCN1BQ07699 AL590135.1-201ENST00000422215 156 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 AC019205.3-201ENST00000424573 156 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 AC105272.1-201ENST00000438604 198 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 AC016700.2-201ENST00000446011 156 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.18□□□□□ -2.06
SCN1BQ07699 TPTE2P5-203ENST00000458118 728 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 RNU7-138P-201ENST00000459479 64 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 MTCO3P38-201ENST00000468910 766 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 AC015911.1-201ENST00000495111 156 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SCN1BQ07699 RNU6-189P-201ENST00000516120 101 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN1BQ07699 HSPE1P4-201ENST00000550617 308 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.18□□□□□ -2.06
SCN1BQ07699 MIR3200-201ENST00000580767 85 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 ZNF720P1-201ENST00000562403 1939 ntBASIC2.18□□□□□ -2.06
SCN1BQ07699 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SCN1BQ07699 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SCN1BQ07699 AP006437.1-201ENST00000641440 3685 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 RNU6-1085P-201ENST00000363576 107 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 SNORD32A-201ENST00000364805 84 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 RNU4-66P-201ENST00000365199 138 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 RNU1-51P-201ENST00000365345 176 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 SNORA41-201ENST00000384675 132 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 SNORA12-201ENST00000391162 147 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 MTCO3P40-201ENST00000392516 676 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 RPL17P50-201ENST00000396131 546 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 MORF4L1P6-201ENST00000418771 268 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 COTL1P1-201ENST00000422309 375 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SCN1BQ07699 AC244670.1-201ENST00000436879 112 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN1BQ07699 AC025750.2-201ENST00000442609 450 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN1BQ07699 PSPHP1-201ENST00000450062 261 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SCN1BQ07699 RNU6-261P-201ENST00000459506 102 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 SRRM1P2-201ENST00000464531 1192 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN1BQ07699 RPL9P6-201ENST00000492764 598 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 AC145146.1-201ENST00000496370 254 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 SNORA14.1-201ENST00000516113 141 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 SNORA31.16-201ENST00000516773 139 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 CENPUP1-201ENST00000526649 1202 ntBASIC2.17□□□□□ -2.06
SCN1BQ07699 AL118558.2-201ENST00000556294 238 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms