Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL603755.1-201ENST00000619504 163 ntBASIC1.8□□□□□ -2.12
CBX1P83916 YWHAEP7-203ENST00000622054 312 ntBASIC1.8□□□□□ -2.12
CBX1P83916 SEPT14P19-203ENST00000633205 211 ntBASIC1.8□□□□□ -2.12
CBX1P83916 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.8□□□□□ -2.12
CBX1P83916 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.8□□□□□ -2.12
CBX1P83916 U8.2-201ENST00000363156 134 ntBASIC1.79□□□□□ -2.12
CBX1P83916 Y_RNA.324-201ENST00000365165 102 ntBASIC1.79□□□□□ -2.12
CBX1P83916 RNA5SP212-201ENST00000391223 107 ntBASIC1.79□□□□□ -2.12
CBX1P83916 RNU6-1245P-201ENST00000411130 106 ntBASIC1.79□□□□□ -2.12
CBX1P83916 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.79□□□□□ -2.12
CBX1P83916 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.79□□□□□ -2.12
CBX1P83916 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.79□□□□□ -2.12
CBX1P83916 AL596276.1-201ENST00000434465 418 ntBASIC1.79□□□□□ -2.12
CBX1P83916 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.79□□□□□ -2.12
CBX1P83916 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.79□□□□□ -2.12
CBX1P83916 SNORD42A-201ENST00000459584 64 ntBASIC1.79□□□□□ -2.12
CBX1P83916 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.79□□□□□ -2.12
CBX1P83916 SNORA18.6-201ENST00000516792 115 ntBASIC1.79□□□□□ -2.12
CBX1P83916 AP005660.1-201ENST00000522972 293 ntBASIC1.79□□□□□ -2.12
CBX1P83916 CBX3P4-201ENST00000538909 354 ntBASIC1.79□□□□□ -2.12
CBX1P83916 AC104581.2-201ENST00000572227 430 ntBASIC1.79□□□□□ -2.12
CBX1P83916 AC245014.2-201ENST00000603689 287 ntBASIC1.79□□□□□ -2.12
CBX1P83916 Z84480.1-201ENST00000605131 311 ntBASIC1.79□□□□□ -2.12
CBX1P83916 AC246785.4-201ENST00000605374 287 ntBASIC1.79□□□□□ -2.12
CBX1P83916 AC087683.2-201ENST00000611384 326 ntBASIC1.79□□□□□ -2.12
CBX1P83916 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
CBX1P83916 AC091304.6-201ENST00000619761 202 ntBASIC1.79□□□□□ -2.12
CBX1P83916 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CBX1P83916 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.78□□□□□ -2.12
CBX1P83916 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CBX1P83916 FGF7P2-201ENST00000332473 296 ntBASIC1.78□□□□□ -2.12
CBX1P83916 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CBX1P83916 RNU6-105P-201ENST00000363909 104 ntBASIC1.78□□□□□ -2.12
CBX1P83916 RNU6-297P-201ENST00000384636 107 ntBASIC1.78□□□□□ -2.12
CBX1P83916 MIR1-2-201ENST00000384961 85 ntBASIC1.78□□□□□ -2.12
CBX1P83916 AL023284.1-201ENST00000403956 276 ntBASIC1.78□□□□□ -2.12
CBX1P83916 RN7SKP51-201ENST00000410781 304 ntBASIC1.78□□□□□ -2.12
CBX1P83916 RNU4-46P-201ENST00000410818 138 ntBASIC1.78□□□□□ -2.12
CBX1P83916 DPH3P2-201ENST00000422618 250 ntBASIC1.78□□□□□ -2.12
CBX1P83916 AL669831.1-202ENST00000428504 417 ntBASIC1.78□□□□□ -2.12
CBX1P83916 GTF2IP13-201ENST00000438487 386 ntBASIC1.78□□□□□ -2.12
CBX1P83916 RPL32P28-201ENST00000443577 397 ntBASIC1.78□□□□□ -2.12
CBX1P83916 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.78□□□□□ -2.12
CBX1P83916 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.78□□□□□ -2.12
CBX1P83916 SNRPGP9-201ENST00000456025 225 ntBASIC1.78□□□□□ -2.12
CBX1P83916 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.78□□□□□ -2.12
CBX1P83916 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.78□□□□□ -2.12
CBX1P83916 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.78□□□□□ -2.12
CBX1P83916 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.78□□□□□ -2.12
CBX1P83916 AC115990.1-201ENST00000526957 301 ntBASIC1.78□□□□□ -2.12
CBX1P83916 AC026464.5-201ENST00000562497 722 ntBASIC1.78□□□□□ -2.12
CBX1P83916 BNIP3P25-201ENST00000596023 559 ntBASIC1.78□□□□□ -2.12
CBX1P83916 AC064872.1-201ENST00000604823 1072 ntBASIC1.78□□□□□ -2.12
CBX1P83916 AC008945.2-201ENST00000606056 604 ntBASIC1.78□□□□□ -2.12
CBX1P83916 AC006566.1-201ENST00000608943 513 ntBASIC1.78□□□□□ -2.12
CBX1P83916 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
CBX1P83916 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.13
CBX1P83916 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU1-58P-201ENST00000362413 163 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-37P-201ENST00000362692 107 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-11P-201ENST00000364234 107 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-1164P-201ENST00000364428 107 ntBASIC1.77□□□□□ -2.13
CBX1P83916 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-25P-201ENST00000383873 107 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-1-201ENST00000383898 107 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-1029P-201ENST00000384109 107 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-48P-201ENST00000384161 107 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-36P-201ENST00000384172 107 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-4P-201ENST00000384205 107 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-5P-201ENST00000384238 107 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-3P-201ENST00000384314 107 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-16P-201ENST00000384385 107 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-15P-201ENST00000384534 107 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-2-201ENST00000384627 107 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-29P-201ENST00000384637 107 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNY3P10-201ENST00000384764 102 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-9-201ENST00000384776 107 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-33P-201ENST00000384793 107 ntBASIC1.77□□□□□ -2.13
CBX1P83916 MIR597-201ENST00000384968 97 ntBASIC1.77□□□□□ -2.13
CBX1P83916 SNORA26.8-201ENST00000391306 124 ntBASIC1.77□□□□□ -2.13
CBX1P83916 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
CBX1P83916 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RN7SKP32-201ENST00000410167 303 ntBASIC1.77□□□□□ -2.13
CBX1P83916 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.77□□□□□ -2.13
CBX1P83916 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CBX1P83916 AL356320.1-201ENST00000429616 163 ntBASIC1.77□□□□□ -2.13
CBX1P83916 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.77□□□□□ -2.13
CBX1P83916 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.77□□□□□ -2.13
CBX1P83916 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.77□□□□□ -2.13
CBX1P83916 RPS29P15-201ENST00000458329 171 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNA5SP269-201ENST00000459032 137 ntBASIC1.77□□□□□ -2.13
CBX1P83916 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.77□□□□□ -2.13
CBX1P83916 AC009646.1-201ENST00000510455 318 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-377P-201ENST00000515965 102 ntBASIC1.77□□□□□ -2.13
CBX1P83916 RNU5F-2P-201ENST00000516066 82 ntBASIC1.77□□□□□ -2.13
CBX1P83916 AC060788.1-201ENST00000521318 469 ntBASIC1.77□□□□□ -2.13
CBX1P83916 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.77□□□□□ -2.13
CBX1P83916 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.77□□□□□ -2.13
CBX1P83916 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.77□□□□□ -2.13
CBX1P83916 RNU6-6P-201ENST00000606623 107 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms