Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 DYNLT3P2-201ENST00000442517 295 ntBASIC0.78□□□□□ -2.28
CCL20P78556 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.78□□□□□ -2.28
CCL20P78556 ART2BP-201ENST00000453501 499 ntBASIC0.78□□□□□ -2.28
CCL20P78556 AC134050.1-201ENST00000495088 933 ntBASIC0.78□□□□□ -2.28
CCL20P78556 AC016550.1-201ENST00000505348 785 ntBASIC0.78□□□□□ -2.28
CCL20P78556 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.78□□□□□ -2.28
CCL20P78556 RNA5SP404-201ENST00000517118 132 ntBASIC0.78□□□□□ -2.28
CCL20P78556 AP003168.1-201ENST00000530091 307 ntBASIC0.78□□□□□ -2.28
CCL20P78556 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.78□□□□□ -2.28
CCL20P78556 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.78□□□□□ -2.28
CCL20P78556 AP003465.2-201ENST00000602571 373 ntBASIC0.78□□□□□ -2.28
CCL20P78556 AL590229.1-201ENST00000603497 542 ntBASIC0.78□□□□□ -2.28
CCL20P78556 MTND3P19-201ENST00000603825 345 ntBASIC0.78□□□□□ -2.28
CCL20P78556 AC069114.2-201ENST00000604699 304 ntBASIC0.78□□□□□ -2.28
CCL20P78556 BNIP3P19-201ENST00000605397 577 ntBASIC0.78□□□□□ -2.28
CCL20P78556 AC004492.1-201ENST00000607036 742 ntBASIC0.78□□□□□ -2.28
CCL20P78556 AC092140.2-201ENST00000618027 521 ntBASIC0.78□□□□□ -2.28
CCL20P78556 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.78□□□□□ -2.28
CCL20P78556 AC026585.1-201ENST00000619582 524 ntBASIC0.78□□□□□ -2.28
CCL20P78556 AP002782.1-201ENST00000623107 614 ntBASIC0.78□□□□□ -2.28
CCL20P78556 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.78□□□□□ -2.28
CCL20P78556 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.78□□□□□ -2.28
CCL20P78556 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CCL20P78556 MTND5P35-201ENST00000557537 1720 ntBASIC0.78□□□□□ -2.29
CCL20P78556 RNY4P24-201ENST00000362735 96 ntBASIC0.77□□□□□ -2.29
CCL20P78556 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.77□□□□□ -2.29
CCL20P78556 AL161935.2-201ENST00000414627 60 ntBASIC0.77□□□□□ -2.29
CCL20P78556 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.77□□□□□ -2.29
CCL20P78556 AC007969.2-201ENST00000441891 191 ntBASIC0.77□□□□□ -2.29
CCL20P78556 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.77□□□□□ -2.29
CCL20P78556 AC145146.1-201ENST00000496370 254 ntBASIC0.77□□□□□ -2.29
CCL20P78556 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.77□□□□□ -2.29
CCL20P78556 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.77□□□□□ -2.29
CCL20P78556 CENPUP1-201ENST00000526649 1202 ntBASIC0.77□□□□□ -2.29
CCL20P78556 AC011979.2-201ENST00000527568 352 ntBASIC0.77□□□□□ -2.29
CCL20P78556 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.77□□□□□ -2.29
CCL20P78556 AC015688.6-201ENST00000577737 104 ntBASIC0.77□□□□□ -2.29
CCL20P78556 MIR4421-201ENST00000578133 69 ntBASIC0.77□□□□□ -2.29
CCL20P78556 VN1R80P-201ENST00000597126 338 ntBASIC0.77□□□□□ -2.29
CCL20P78556 AC018889.1-201ENST00000605372 397 ntBASIC0.77□□□□□ -2.29
CCL20P78556 MIR8065-201ENST00000620577 100 ntBASIC0.77□□□□□ -2.29
CCL20P78556 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.77□□□□□ -2.29
CCL20P78556 AL445523.1-201ENST00000451184 1362 ntBASIC0.77□□□□□ -2.29
CCL20P78556 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CCL20P78556 AC010615.1-201ENST00000594254 1764 ntBASIC0.76□□□□□ -2.29
CCL20P78556 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
CCL20P78556 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
CCL20P78556 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.76□□□□□ -2.29
CCL20P78556 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CCL20P78556 MIR340-201ENST00000362125 95 ntBASIC0.76□□□□□ -2.29
CCL20P78556 RNU6-78P-201ENST00000362897 107 ntBASIC0.76□□□□□ -2.29
CCL20P78556 RNU6-1257P-201ENST00000384625 110 ntBASIC0.76□□□□□ -2.29
CCL20P78556 MIR578-201ENST00000384828 96 ntBASIC0.76□□□□□ -2.29
CCL20P78556 MIR544A-201ENST00000384855 91 ntBASIC0.76□□□□□ -2.29
CCL20P78556 RAP1BP3-201ENST00000407180 549 ntBASIC0.76□□□□□ -2.29
CCL20P78556 MTCO3P41-201ENST00000414801 328 ntBASIC0.76□□□□□ -2.29
CCL20P78556 RPS3AP37-201ENST00000419176 745 ntBASIC0.76□□□□□ -2.29
CCL20P78556 RPS15AP12-201ENST00000419498 388 ntBASIC0.76□□□□□ -2.29
CCL20P78556 MTND4P20-201ENST00000424125 869 ntBASIC0.76□□□□□ -2.29
CCL20P78556 SNRPEP8-201ENST00000442866 260 ntBASIC0.76□□□□□ -2.29
CCL20P78556 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.76□□□□□ -2.29
CCL20P78556 AC132479.1-201ENST00000449160 144 ntBASIC0.76□□□□□ -2.29
CCL20P78556 snoU13.30-201ENST00000458951 104 ntBASIC0.76□□□□□ -2.29
CCL20P78556 AC116337.1-201ENST00000509680 687 ntBASIC0.76□□□□□ -2.29
CCL20P78556 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.76□□□□□ -2.29
CCL20P78556 RNU5A-4P-201ENST00000516588 111 ntBASIC0.76□□□□□ -2.29
CCL20P78556 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC0.76□□□□□ -2.29
CCL20P78556 MTATP6P15-201ENST00000527233 835 ntBASIC0.76□□□□□ -2.29
CCL20P78556 ADI1P3-201ENST00000549509 470 ntBASIC0.76□□□□□ -2.29
CCL20P78556 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.76□□□□□ -2.29
CCL20P78556 HSPE1P19-201ENST00000603327 295 ntBASIC0.76□□□□□ -2.29
CCL20P78556 AL592221.1-201ENST00000605266 382 ntBASIC0.76□□□□□ -2.29
CCL20P78556 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.76□□□□□ -2.29
CCL20P78556 AC092106.3-201ENST00000611308 722 ntBASIC0.76□□□□□ -2.29
CCL20P78556 AL138955.1-201ENST00000622881 1040 ntBASIC0.76□□□□□ -2.29
CCL20P78556 AC009033.1-201ENST00000624279 431 ntBASIC0.76□□□□□ -2.29
CCL20P78556 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.76□□□□□ -2.29
CCL20P78556 AC099654.5-201ENST00000636479 350 ntBASIC0.76□□□□□ -2.29
CCL20P78556 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.75□□□□□ -2.29
CCL20P78556 RNU4-15P-201ENST00000362613 141 ntBASIC0.75□□□□□ -2.29
CCL20P78556 MTATP6P20-201ENST00000414147 562 ntBASIC0.75□□□□□ -2.29
CCL20P78556 AC019070.1-201ENST00000415008 1024 ntBASIC0.75□□□□□ -2.29
CCL20P78556 AL353777.1-201ENST00000425552 326 ntBASIC0.75□□□□□ -2.29
CCL20P78556 AL591043.1-201ENST00000432461 424 ntBASIC0.75□□□□□ -2.29
CCL20P78556 AC245047.4-201ENST00000433189 144 ntBASIC0.75□□□□□ -2.29
CCL20P78556 AC099677.2-201ENST00000436385 175 ntBASIC0.75□□□□□ -2.29
CCL20P78556 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.75□□□□□ -2.29
CCL20P78556 MTND1P30-201ENST00000441241 901 ntBASIC0.75□□□□□ -2.29
CCL20P78556 PGBD4P5-201ENST00000445958 426 ntBASIC0.75□□□□□ -2.29
CCL20P78556 RPL39P28-201ENST00000465655 155 ntBASIC0.75□□□□□ -2.29
CCL20P78556 AC114982.1-201ENST00000469402 321 ntBASIC0.75□□□□□ -2.29
CCL20P78556 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.75□□□□□ -2.29
CCL20P78556 AL163195.1-201ENST00000496941 348 ntBASIC0.75□□□□□ -2.29
CCL20P78556 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.75□□□□□ -2.29
CCL20P78556 RNU7-51P-201ENST00000516560 62 ntBASIC0.75□□□□□ -2.29
CCL20P78556 RNA5SP481-201ENST00000516814 122 ntBASIC0.75□□□□□ -2.29
CCL20P78556 SNORD60.2-201ENST00000516883 86 ntBASIC0.75□□□□□ -2.29
CCL20P78556 AC107934.1-201ENST00000522215 217 ntBASIC0.75□□□□□ -2.29
CCL20P78556 AC115990.1-201ENST00000526957 301 ntBASIC0.75□□□□□ -2.29
CCL20P78556 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms