Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.14□□□□□ -2.39
UBA52P62987 GAPDHP17-201ENST00000449858 1001 ntBASIC0.14□□□□□ -2.39
UBA52P62987 RNU6-885P-201ENST00000516607 104 ntBASIC0.14□□□□□ -2.39
UBA52P62987 AC090502.2-201ENST00000549267 280 ntBASIC0.14□□□□□ -2.39
UBA52P62987 AC073410.2-201ENST00000603240 332 ntBASIC0.14□□□□□ -2.39
UBA52P62987 RNU6-1167P-201ENST00000363227 94 ntBASIC0.13□□□□□ -2.39
UBA52P62987 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
UBA52P62987 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
UBA52P62987 AC019070.1-201ENST00000415008 1024 ntBASIC0.13□□□□□ -2.39
UBA52P62987 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.13□□□□□ -2.39
UBA52P62987 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.13□□□□□ -2.39
UBA52P62987 RPL30P6-201ENST00000475925 342 ntBASIC0.13□□□□□ -2.39
UBA52P62987 CYCTP-201ENST00000504253 315 ntBASIC0.13□□□□□ -2.39
UBA52P62987 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.13□□□□□ -2.39
UBA52P62987 AC048346.1-201ENST00000510247 144 ntBASIC0.13□□□□□ -2.39
UBA52P62987 RNU4-77P-201ENST00000516692 156 ntBASIC0.13□□□□□ -2.39
UBA52P62987 RN7SKP256-201ENST00000517201 314 ntBASIC0.13□□□□□ -2.39
UBA52P62987 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.13□□□□□ -2.39
UBA52P62987 EIF4A1P12-201ENST00000551910 141 ntBASIC0.13□□□□□ -2.39
UBA52P62987 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.13□□□□□ -2.39
UBA52P62987 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.13□□□□□ -2.39
UBA52P62987 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.13□□□□□ -2.39
UBA52P62987 AC093519.1-201ENST00000566109 298 ntBASIC0.13□□□□□ -2.39
UBA52P62987 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.13□□□□□ -2.39
UBA52P62987 AC090578.1-201ENST00000604955 591 ntBASIC0.13□□□□□ -2.39
UBA52P62987 AC096586.1-201ENST00000610267 561 ntBASIC0.13□□□□□ -2.39
UBA52P62987 AC120349.3-201ENST00000624377 529 ntBASIC0.13□□□□□ -2.39
UBA52P62987 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.13□□□□□ -2.39
UBA52P62987 U6.101-201ENST00000637707 76 ntBASIC0.13□□□□□ -2.39
UBA52P62987 MTND4P12-201ENST00000498999 1377 ntBASIC0.12□□□□□ -2.39
UBA52P62987 RNU6-188P-201ENST00000364207 107 ntBASIC0.12□□□□□ -2.39
UBA52P62987 RNU6-1280P-201ENST00000365211 107 ntBASIC0.12□□□□□ -2.39
UBA52P62987 Y_RNA.458-201ENST00000384240 102 ntBASIC0.12□□□□□ -2.39
UBA52P62987 MIR525-201ENST00000384978 85 ntBASIC0.12□□□□□ -2.39
UBA52P62987 TAF13P2-201ENST00000416876 286 ntBASIC0.12□□□□□ -2.39
UBA52P62987 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
UBA52P62987 BTF3L4P3-201ENST00000418879 476 ntBASIC0.12□□□□□ -2.39
UBA52P62987 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
UBA52P62987 ISCA1P1-201ENST00000426679 387 ntBASIC0.12□□□□□ -2.39
UBA52P62987 AC093422.3-201ENST00000428506 305 ntBASIC0.12□□□□□ -2.39
UBA52P62987 RPS27AP8-201ENST00000452665 445 ntBASIC0.12□□□□□ -2.39
UBA52P62987 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.12□□□□□ -2.39
UBA52P62987 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.12□□□□□ -2.39
UBA52P62987 RNA5SP269-201ENST00000459032 137 ntBASIC0.12□□□□□ -2.39
UBA52P62987 HMGB1P30-201ENST00000492455 606 ntBASIC0.12□□□□□ -2.39
UBA52P62987 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.12□□□□□ -2.39
UBA52P62987 APOOP3-201ENST00000536787 586 ntBASIC0.12□□□□□ -2.39
UBA52P62987 AC095057.3-201ENST00000567102 1157 ntBASIC0.12□□□□□ -2.39
UBA52P62987 AC107304.1-201ENST00000604229 296 ntBASIC0.12□□□□□ -2.39
UBA52P62987 AL360085.1-201ENST00000604713 532 ntBASIC0.12□□□□□ -2.39
UBA52P62987 AC112220.2-201ENST00000605513 533 ntBASIC0.12□□□□□ -2.39
UBA52P62987 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.12□□□□□ -2.39
UBA52P62987 AC009509.4-201ENST00000619202 509 ntBASIC0.12□□□□□ -2.39
UBA52P62987 AC130454.1-201ENST00000622948 401 ntBASIC0.12□□□□□ -2.39
UBA52P62987 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
UBA52P62987 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
UBA52P62987 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.12□□□□□ -2.39
UBA52P62987 RNU6-1010P-201ENST00000362757 107 ntBASIC0.11□□□□□ -2.39
UBA52P62987 SNORD114-19-201ENST00000363072 75 ntBASIC0.11□□□□□ -2.39
UBA52P62987 RNU6-969P-201ENST00000383900 105 ntBASIC0.11□□□□□ -2.39
UBA52P62987 RNU6-35P-201ENST00000384530 107 ntBASIC0.11□□□□□ -2.39
UBA52P62987 MIR520A-201ENST00000384862 85 ntBASIC0.11□□□□□ -2.39
UBA52P62987 MIR32-201ENST00000384965 70 ntBASIC0.11□□□□□ -2.39
UBA52P62987 RNU6-910P-201ENST00000390844 107 ntBASIC0.11□□□□□ -2.39
UBA52P62987 RPS3AP37-201ENST00000419176 745 ntBASIC0.11□□□□□ -2.39
UBA52P62987 AL035398.1-201ENST00000430869 322 ntBASIC0.11□□□□□ -2.39
UBA52P62987 RPL36AP53-201ENST00000432891 316 ntBASIC0.11□□□□□ -2.39
UBA52P62987 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.11□□□□□ -2.39
UBA52P62987 MTCO3P18-201ENST00000440206 761 ntBASIC0.11□□□□□ -2.39
UBA52P62987 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.11□□□□□ -2.39
UBA52P62987 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.11□□□□□ -2.39
UBA52P62987 TRBVB-201ENST00000477100 408 ntBASIC0.11□□□□□ -2.39
UBA52P62987 AC108740.1-201ENST00000498629 225 ntBASIC0.11□□□□□ -2.39
UBA52P62987 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.11□□□□□ -2.39
UBA52P62987 MTCO3P7-201ENST00000510008 774 ntBASIC0.11□□□□□ -2.39
UBA52P62987 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.11□□□□□ -2.39
UBA52P62987 MIR5190-201ENST00000581537 80 ntBASIC0.11□□□□□ -2.39
UBA52P62987 AL353997.4-201ENST00000586196 166 ntBASIC0.11□□□□□ -2.39
UBA52P62987 AC068790.6-201ENST00000602558 258 ntBASIC0.11□□□□□ -2.39
UBA52P62987 AC011451.2-201ENST00000604303 598 ntBASIC0.11□□□□□ -2.39
UBA52P62987 AC009032.1-201ENST00000617574 431 ntBASIC0.11□□□□□ -2.39
UBA52P62987 Y_RNA.363-201ENST00000365529 113 ntBASIC0.1□□□□□ -2.39
UBA52P62987 MIR7-1-201ENST00000384871 110 ntBASIC0.1□□□□□ -2.39
UBA52P62987 RAB28P5-201ENST00000427490 651 ntBASIC0.1□□□□□ -2.39
UBA52P62987 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.1□□□□□ -2.39
UBA52P62987 RPS25P9-201ENST00000435591 252 ntBASIC0.1□□□□□ -2.39
UBA52P62987 USP9YP22-201ENST00000438971 294 ntBASIC0.1□□□□□ -2.39
UBA52P62987 RNU1-131P-201ENST00000458943 161 ntBASIC0.1□□□□□ -2.39
UBA52P62987 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.1□□□□□ -2.39
UBA52P62987 AC023194.1-201ENST00000493084 308 ntBASIC0.1□□□□□ -2.39
UBA52P62987 SNORA31.2-201ENST00000516019 134 ntBASIC0.1□□□□□ -2.39
UBA52P62987 SNORA31.4-201ENST00000516049 129 ntBASIC0.1□□□□□ -2.39
UBA52P62987 SNORD79.1-201ENST00000516069 84 ntBASIC0.1□□□□□ -2.39
UBA52P62987 RNA5SP135-201ENST00000517019 125 ntBASIC0.1□□□□□ -2.39
UBA52P62987 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.1□□□□□ -2.39
UBA52P62987 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.1□□□□□ -2.39
UBA52P62987 Z83818.1-201ENST00000603584 150 ntBASIC0.1□□□□□ -2.39
UBA52P62987 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.09□□□□□ -2.4
UBA52P62987 AC090625.1-201ENST00000357130 210 ntBASIC0.09□□□□□ -2.4
UBA52P62987 RNU6-349P-201ENST00000362402 107 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms