Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RNU6-120P-201ENST00000516077 103 ntBASIC2.36□□□□□ -2.03
LMO4P61968 RNA5SP384-201ENST00000516615 116 ntBASIC2.36□□□□□ -2.03
LMO4P61968 RNU6-699P-201ENST00000517081 110 ntBASIC2.36□□□□□ -2.03
LMO4P61968 COX6CP5-201ENST00000527162 228 ntBASIC2.36□□□□□ -2.03
LMO4P61968 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.36□□□□□ -2.03
LMO4P61968 MIR4503-201ENST00000582187 83 ntBASIC2.36□□□□□ -2.03
LMO4P61968 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.36□□□□□ -2.03
LMO4P61968 AC011494.1-201ENST00000596454 237 ntBASIC2.36□□□□□ -2.03
LMO4P61968 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.36□□□□□ -2.03
LMO4P61968 AC136601.2-201ENST00000604356 474 ntBASIC2.36□□□□□ -2.03
LMO4P61968 ELOCP5-201ENST00000604924 333 ntBASIC2.36□□□□□ -2.03
LMO4P61968 AC005014.2-201ENST00000607795 599 ntBASIC2.36□□□□□ -2.03
LMO4P61968 AC087588.2-201ENST00000617667 426 ntBASIC2.36□□□□□ -2.03
LMO4P61968 AC110079.1-202ENST00000635213 138 ntBASIC2.36□□□□□ -2.03
LMO4P61968 AC099654.7-201ENST00000635788 2127 ntBASIC2.36□□□□□ -2.03
LMO4P61968 AC008669.1-201ENST00000565823 2178 ntBASIC2.36□□□□□ -2.03
LMO4P61968 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LMO4P61968 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LMO4P61968 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.35□□□□□ -2.03
LMO4P61968 AL021368.2-201ENST00000606125 5352 ntBASIC2.35□□□□□ -2.03
LMO4P61968 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.35□□□□□ -2.03
LMO4P61968 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.35□□□□□ -2.03
LMO4P61968 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.35□□□□□ -2.03
LMO4P61968 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LMO4P61968 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
LMO4P61968 RNU6-214P-201ENST00000384130 107 ntBASIC2.35□□□□□ -2.03
LMO4P61968 Y_RNA.480-201ENST00000384364 102 ntBASIC2.35□□□□□ -2.03
LMO4P61968 Y_RNA.527-201ENST00000384573 102 ntBASIC2.35□□□□□ -2.03
LMO4P61968 RNU6-331P-201ENST00000384724 107 ntBASIC2.35□□□□□ -2.03
LMO4P61968 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.35□□□□□ -2.03
LMO4P61968 AL592148.1-201ENST00000413568 445 ntBASIC2.35□□□□□ -2.03
LMO4P61968 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.35□□□□□ -2.03
LMO4P61968 AC243428.1-201ENST00000421099 264 ntBASIC2.35□□□□□ -2.03
LMO4P61968 MTCYBP10-201ENST00000424905 650 ntBASIC2.35□□□□□ -2.03
LMO4P61968 AC063976.3-201ENST00000426849 329 ntBASIC2.35□□□□□ -2.03
LMO4P61968 AL592045.1-201ENST00000429867 352 ntBASIC2.35□□□□□ -2.03
LMO4P61968 MTCYBP9-201ENST00000431021 303 ntBASIC2.35□□□□□ -2.03
LMO4P61968 RPL23AP22-201ENST00000437556 453 ntBASIC2.35□□□□□ -2.03
LMO4P61968 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.35□□□□□ -2.03
LMO4P61968 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.35□□□□□ -2.03
LMO4P61968 RNU7-138P-201ENST00000459479 64 ntBASIC2.35□□□□□ -2.03
LMO4P61968 AC087588.1-201ENST00000462203 316 ntBASIC2.35□□□□□ -2.03
LMO4P61968 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.35□□□□□ -2.03
LMO4P61968 SNORA25.10-201ENST00000515926 124 ntBASIC2.35□□□□□ -2.03
LMO4P61968 RNU6-470P-201ENST00000515954 104 ntBASIC2.35□□□□□ -2.03
LMO4P61968 RNU6-764P-201ENST00000516396 105 ntBASIC2.35□□□□□ -2.03
LMO4P61968 SCARNA16.2-201ENST00000516520 172 ntBASIC2.35□□□□□ -2.03
LMO4P61968 RNA5SP471-201ENST00000516971 106 ntBASIC2.35□□□□□ -2.03
LMO4P61968 AC104576.1-201ENST00000524225 88 ntBASIC2.35□□□□□ -2.03
LMO4P61968 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.35□□□□□ -2.03
LMO4P61968 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.35□□□□□ -2.03
LMO4P61968 AC010653.1-201ENST00000571108 881 ntBASIC2.35□□□□□ -2.03
LMO4P61968 LRRC37A5P-203ENST00000580181 585 ntBASIC2.35□□□□□ -2.03
LMO4P61968 FTX_3.1-201ENST00000610451 147 ntBASIC2.35□□□□□ -2.03
LMO4P61968 AC006157.1-201ENST00000611750 366 ntBASIC2.35□□□□□ -2.03
LMO4P61968 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LMO4P61968 AC138305.3-201ENST00000624988 240 ntBASIC2.35□□□□□ -2.03
LMO4P61968 GABRG2-229ENST00000641017 3628 ntBASIC2.35□□□□□ -2.03
LMO4P61968 AC092435.3-201ENST00000565538 3654 ntBASIC2.34□□□□□ -2.03
LMO4P61968 AC093010.3-201ENST00000570269 15214 ntBASIC2.34□□□□□ -2.03
LMO4P61968 RNU6-1167P-201ENST00000363227 94 ntBASIC2.34□□□□□ -2.03
LMO4P61968 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.34□□□□□ -2.03
LMO4P61968 AC008267.5-201ENST00000424928 265 ntBASIC2.34□□□□□ -2.03
LMO4P61968 USMG5P1-201ENST00000425964 177 ntBASIC2.34□□□□□ -2.03
LMO4P61968 HMGB1P9-201ENST00000429856 646 ntBASIC2.34□□□□□ -2.03
LMO4P61968 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.34□□□□□ -2.03
LMO4P61968 AL714022.1-201ENST00000439897 151 ntBASIC2.34□□□□□ -2.03
LMO4P61968 AL109933.2-201ENST00000452651 260 ntBASIC2.34□□□□□ -2.03
LMO4P61968 BTF3P15-201ENST00000455606 336 ntBASIC2.34□□□□□ -2.03
LMO4P61968 RPL26P9-201ENST00000457466 433 ntBASIC2.34□□□□□ -2.03
LMO4P61968 MTCO2P24-201ENST00000515611 426 ntBASIC2.34□□□□□ -2.03
LMO4P61968 RN7SKP43-201ENST00000516173 320 ntBASIC2.34□□□□□ -2.03
LMO4P61968 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.34□□□□□ -2.03
LMO4P61968 AC093331.1-201ENST00000521474 169 ntBASIC2.34□□□□□ -2.03
LMO4P61968 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.34□□□□□ -2.03
LMO4P61968 AL391261.3-201ENST00000557194 520 ntBASIC2.34□□□□□ -2.03
LMO4P61968 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.34□□□□□ -2.03
LMO4P61968 MIR5692A1-201ENST00000580523 69 ntBASIC2.34□□□□□ -2.03
LMO4P61968 MIR548AC-201ENST00000585049 88 ntBASIC2.34□□□□□ -2.03
LMO4P61968 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
LMO4P61968 RPL23AP78-201ENST00000599928 470 ntBASIC2.34□□□□□ -2.03
LMO4P61968 AC107294.1-201ENST00000609524 467 ntBASIC2.34□□□□□ -2.03
LMO4P61968 AC034102.8-201ENST00000615146 484 ntBASIC2.34□□□□□ -2.03
LMO4P61968 AL162373.1-201ENST00000620433 407 ntBASIC2.34□□□□□ -2.03
LMO4P61968 AL031601.2-202ENST00000622650 282 ntBASIC2.34□□□□□ -2.03
LMO4P61968 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.34□□□□□ -2.03
LMO4P61968 AL512643.1-201ENST00000635735 524 ntBASIC2.34□□□□□ -2.03
LMO4P61968 Z99571.1-201ENST00000636677 394 ntBASIC2.34□□□□□ -2.03
LMO4P61968 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.34□□□□□ -2.04
LMO4P61968 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.34□□□□□ -2.04
LMO4P61968 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
LMO4P61968 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LMO4P61968 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.33□□□□□ -2.04
LMO4P61968 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.33□□□□□ -2.04
LMO4P61968 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.33□□□□□ -2.04
LMO4P61968 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.33□□□□□ -2.04
LMO4P61968 UBE2L2-201ENST00000254302 429 ntBASIC2.33□□□□□ -2.04
LMO4P61968 MIR449A-201ENST00000362113 91 ntBASIC2.33□□□□□ -2.04
LMO4P61968 Y_RNA.151-201ENST00000363566 112 ntBASIC2.33□□□□□ -2.04
LMO4P61968 RNU1-112P-201ENST00000364401 164 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms