Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
CKS1BP61024 MIR373-201ENST00000362273 69 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 RNU6-331P-201ENST00000384724 107 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 RNU6-910P-201ENST00000390844 107 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 RNA5SP390-201ENST00000410191 113 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.33□□□□□ -2.36
CKS1BP61024 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.33□□□□□ -2.36
CKS1BP61024 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.33□□□□□ -2.36
CKS1BP61024 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.33□□□□□ -2.36
CKS1BP61024 AC123900.1-201ENST00000420390 96 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 AL590556.1-201ENST00000423231 483 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 AC244023.1-201ENST00000426884 112 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 RAB28P5-201ENST00000427490 651 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.33□□□□□ -2.36
CKS1BP61024 NEFMP1-201ENST00000443423 1006 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 MTND1P18-201ENST00000448191 573 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 snoU13.30-201ENST00000458951 104 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 RPS26P45-201ENST00000471748 340 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 AC104563.1-201ENST00000476147 376 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 AC005840.1-201ENST00000498412 377 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 AC008015.1-201ENST00000555505 465 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 AC242498.1-201ENST00000604134 111 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 AL450270.1-201ENST00000606160 391 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 AC063943.3-201ENST00000615562 356 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 AC243994.1-201ENST00000618627 109 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 CDR1-202ENST00000625883 1485 ntBASIC0.33□□□□□ -2.36
CKS1BP61024 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.33□□□□□ -2.36
CKS1BP61024 MTND4P21-201ENST00000453886 1357 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 MIR301A-201ENST00000385261 86 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 AP000275.1-201ENST00000411943 390 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 AC114737.2-201ENST00000421583 173 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 CETN4P-201ENST00000432407 469 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 SEPT7P5-201ENST00000434048 306 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 LARP1BP3-201ENST00000437229 869 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 AC069257.2-201ENST00000441819 155 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 AC098869.1-201ENST00000481627 292 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 AC005741.1-201ENST00000511094 432 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 SNORA31.2-201ENST00000516019 134 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 RNA5SP255-201ENST00000516370 107 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.32□□□□□ -2.36
CKS1BP61024 SLC2A13P1-201ENST00000531560 322 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 MTCYBP33-201ENST00000575007 1130 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 AC090330.1-201ENST00000588646 764 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 VN1R82P-201ENST00000601481 356 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 AL353765.1-201ENST00000605514 183 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 AL158163.2-201ENST00000619110 700 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 AC007792.1-201ENST00000623023 402 ntBASIC0.32□□□□□ -2.36
CKS1BP61024 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.32□□□□□ -2.36
CKS1BP61024 MIR337-201ENST00000362281 93 ntBASIC0.31□□□□□ -2.36
CKS1BP61024 RNY1P10-201ENST00000363268 113 ntBASIC0.31□□□□□ -2.36
CKS1BP61024 RAP1BP3-201ENST00000407180 549 ntBASIC0.31□□□□□ -2.36
CKS1BP61024 AC016831.2-201ENST00000417179 352 ntBASIC0.31□□□□□ -2.36
CKS1BP61024 AC013262.1-201ENST00000426710 252 ntBASIC0.31□□□□□ -2.36
CKS1BP61024 AC114878.1-201ENST00000441166 358 ntBASIC0.31□□□□□ -2.36
CKS1BP61024 DEFB108E-201ENST00000524692 240 ntBASIC0.31□□□□□ -2.36
CKS1BP61024 AC092451.2-201ENST00000538746 658 ntBASIC0.31□□□□□ -2.36
CKS1BP61024 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.31□□□□□ -2.36
CKS1BP61024 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.31□□□□□ -2.36
CKS1BP61024 CYP3A137P-201ENST00000562436 69 ntBASIC0.31□□□□□ -2.36
CKS1BP61024 MIR4789-201ENST00000577469 82 ntBASIC0.31□□□□□ -2.36
CKS1BP61024 AC105148.1-201ENST00000604961 409 ntBASIC0.31□□□□□ -2.36
CKS1BP61024 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.31□□□□□ -2.36
CKS1BP61024 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.31□□□□□ -2.36
CKS1BP61024 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.31□□□□□ -2.36
CKS1BP61024 AC009541.1-201ENST00000438279 2662 ntBASIC0.3□□□□□ -2.36
CKS1BP61024 RNA5SP347-201ENST00000362445 119 ntBASIC0.3□□□□□ -2.36
CKS1BP61024 RNU6-942P-201ENST00000363002 107 ntBASIC0.3□□□□□ -2.36
CKS1BP61024 RNA5SP259-201ENST00000365541 109 ntBASIC0.3□□□□□ -2.36
CKS1BP61024 RNU6-817P-201ENST00000391083 104 ntBASIC0.3□□□□□ -2.36
CKS1BP61024 MIR942-201ENST00000401111 86 ntBASIC0.3□□□□□ -2.36
CKS1BP61024 RNU4-27P-201ENST00000410889 139 ntBASIC0.3□□□□□ -2.36
CKS1BP61024 AC005094.1-201ENST00000440420 368 ntBASIC0.3□□□□□ -2.36
CKS1BP61024 RPL7P55-201ENST00000450522 746 ntBASIC0.3□□□□□ -2.36
CKS1BP61024 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.3□□□□□ -2.36
CKS1BP61024 RNU6-583P-201ENST00000516012 92 ntBASIC0.3□□□□□ -2.36
CKS1BP61024 RNA5SP384-201ENST00000516615 116 ntBASIC0.3□□□□□ -2.36
CKS1BP61024 RNA5SP102-201ENST00000516865 106 ntBASIC0.3□□□□□ -2.36
CKS1BP61024 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.3□□□□□ -2.36
CKS1BP61024 AC023050.2-201ENST00000544968 387 ntBASIC0.3□□□□□ -2.36
CKS1BP61024 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.3□□□□□ -2.36
CKS1BP61024 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.3□□□□□ -2.36
CKS1BP61024 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.3□□□□□ -2.36
CKS1BP61024 MIR5087-201ENST00000635826 76 ntBASIC0.3□□□□□ -2.36
CKS1BP61024 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.3□□□□□ -2.36
CKS1BP61024 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.3□□□□□ -2.36
CKS1BP61024 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CKS1BP61024 RNU4-12P-201ENST00000365233 139 ntBASIC0.29□□□□□ -2.36
CKS1BP61024 RNU6-1122P-201ENST00000384449 107 ntBASIC0.29□□□□□ -2.36
CKS1BP61024 RNU6-14P-201ENST00000384630 106 ntBASIC0.29□□□□□ -2.36
CKS1BP61024 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.29□□□□□ -2.36
CKS1BP61024 MTCO3P29-201ENST00000432119 779 ntBASIC0.29□□□□□ -2.36
CKS1BP61024 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.29□□□□□ -2.36
CKS1BP61024 SNRPFP3-201ENST00000457792 225 ntBASIC0.29□□□□□ -2.36
CKS1BP61024 RPL39P38-201ENST00000467018 153 ntBASIC0.29□□□□□ -2.36
CKS1BP61024 AC034244.1-201ENST00000507687 207 ntBASIC0.29□□□□□ -2.36
CKS1BP61024 SNORD79.1-201ENST00000516069 84 ntBASIC0.29□□□□□ -2.36
CKS1BP61024 AC091163.3-201ENST00000518269 1144 ntBASIC0.29□□□□□ -2.36
CKS1BP61024 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.29□□□□□ -2.36
CKS1BP61024 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms